Gene detail

Detailed information of XP_073246563.1 in Porites lutea

Genomic Location: chr6:15051148...15068455
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073390462.1

GCAACGTAAACAAAGATGGCGGCCTGTTTCAAATGTGCGGTTGTGTTCATTTCGTAAAGTTTTTGTGCAAAGAAGAGAATGTCACAGGATGAAGGTGTTATTTCTACCAACGACGATGCAAGTGCTTGCAAGAGgTTTGCTGTTCAGCTAGGTTATTGGTCAGATAATTATATTCAGCACTTCACAAGGCTTGGAGAGAGAAAGACTCCAGAAATCAATAGAGGTTACTATGCTCGTGTTAAAGGAATGCGAACTCTTTTGGACCAATTTCTCACGCAGACGCACTGTAAATGTCAGGTTATCAATCTTGGCGCAGGATTTGATTCCCTCTTTTGGCTGTTAAAGGAGGATGGCTTATTGCCAAAGCTATTTGTGGAGATAGATTTTGGAAATGTAACCAGCAGAAAGTGTTACAGCATAAGGGCAAGGAGAAAACTTCAGGAAGTCTTTTCTCAAGATGATGGATTGAAAATTGAAGGAAATGAAGCTCACTCTAAACATTATCACCTACTAGCTGCTGATCTGAGAGATATAAGTATACTTGAAAGCAAATTGAATGAAATTGGGATTGATAAAAGCCTACCAACAGTGTTCATCACTGAGTGTGTGTTGGTTTACATGGAGCCTGAACATTCAGCTGCCATAATTAACTGGGCAGGATCAAATTTCAAAACTGCTCTTTTTATTAACTACGAACAGGTGAATATGCAGGACAGATTTGGTCAAGTTATGATCCAGAATCTCAGAGGTAGAAATTGTGAACTTCTTGGTGCATTTGCTTGTCCAGATCTTGAATCACATAGGCAAAGATTCCTGGCACATAACTGGGAGAGAGCAGAAGTTCTTGACATGATGAATGTCTACAACTGCCTACCTTTTAATGACAGAAcaagaaTAGAGAGAATCGAATTTCTTGATGAAGTTGACCTTCTGCACCAGTTACTTTCTCATTATTGTATCGCCTGGGCAGTGAATGATGCTTCACAGCTTGGTTTATCAAGCATTGCTTTTTGAGAGGAGTTATAAGCTGTAATGAAAATGGCAAAACGTTTAGCCTTGTTCATGCTTGACGTTTGCTCGCTGCTGAAGTGCTTTGAAACCTTAAAGCCTTATTACATGAAGCACAGACATACCAGTCATTGTTCGAGTAGTACATGGTGTATGGTTGtgaacatttcttttttctttttcattttttctggtTACAACTACCCCTAAATGACTCAGACCGACAGTTTGAATCGTGTTCAATACAGCAAGTAAGGAAAGCAGTGTGATAAATGAATTGTTGTTATTTAATAGTGAGTAACTTCTAATTTGGCACAAGCTACTCTGATTcttattataaaataaaaacgatGAGGTGAATTGCAATAGAATAGTATTACAGTAACATTTCAACGTCAAGCCAGGTATTGCATCCCCTCGCATTAGGCAGAACGAATTCTAATTGAGAAAACGGAGGCATTTTTAGAACTTGTATGACTTACAGGCTActcctttgcaaaaatagaTTTTATAGTTAATACTGTCTGAAGAAGATTGTTGTAGGCAAGAGCTATTTTTCTATAATTTATAAAGTAATCAACATGACTTCGTAGGTTATGTTTCACTTTGATTTTGGATTGTGCACAGAGTTTAGTCTCATTTGCTAAATAATATATGCCAAAAGGGTTTGTAACCCTCTTAAAAACCGCTCTTAATATACAGGGGCCTGCGGCCCGTATCTTGAAAGTCCcagtaacttttcgggcccgaaataatgttaaaaaaagaatgttaGAGCAGGCTCCGGCGTCCTAACCAGTCCATTTTGCTTCTTTATCTGACCCCAGTTGTTCAAGAggtggatagcgccatccaccGCATAAAtctctgtccagtggataatgtGCAATTAATTATCCActgaatagagatttatccggtggatagcgctgtccagCTTTTGAACCTCTGGAGCCTGATGATTTTATTGTATCGTTTTCAGAGCTATTATACCACGATCTTGAATCCAAACACTGCAAACATGAAACAGCTTTCCTGCTCAGTACTTTACGGGACCTTCGAGAAACGAGCTTCAGGGCCTTCAATAAAATGTTATCTTAAGTTATTGTTTCTTAAcattaaaaacacaaaaattatgatttttcGTAGCTTGAATCCGGCCCCATCTGATCTGTTTTTCCTCATAATGCCACAATTTATTTGGTCATGTTCATGCTAATAAAGGAATTTATTACAAAAGAGAACCT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04072 all species →	LCM	Leucine carboxyl methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR016651 all species →	Family	Leucine carboxyl methyltransferase 1	Interproscan
IPR007213 all species →	Family	Methyltransferase Ppm1/Ppm2/Tcmp	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13600 all species →	LEUCINE CARBOXYL METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006481 all species →	Biological Process	C-terminal protein methylation	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0018423 all species →	Molecular Function	protein C-terminal leucine carboxyl O-methyltransferase activity	Interproscan
GO:0032259 all species →	Biological Process	methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18203	LCMT1; [phosphatase 2A protein]-leucine-carboxy methyltransferase	EC:2.1.1.233	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.