Gene detail

Detailed information of XP_073246590.1 in Porites lutea

Genomic Location: chr6:12924137...12930156
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073390489.1

GCAAGATGGCCGACAAGTTTCTTCGTTACAGCACATTTTAGGACGTTTTTGTAGGTTTATTGTTCAAGAACGCATCAAGGAACACTCACCACAGGAAGGGTCATCGATGCTTTTAATTTGCTGATTTTTGCAGAGTGAATTATCCCAGAATCTTCCCATGCTGTGGTCGCTTCTTCGAGTCGCTTCCCGGTCTCAAAGGACTCTCTATCAGAACTCTTTTCTTCGACTTCAGAATTCGAGATTTTCATGGAGTTTAAGTTCACGATATGTTTACAGTTCATCGTGGATTTTGCAGTTCGGTCTTCAACAAAGGACGATTTTTTCCAGATGCGTTGAACATCTCAATAAAGCGAGTAGTACTTTGTTTGGAGCCAAGCTACCTCTGATAACATTTGACTCAAGTTTGCTGCATTATGAAACACGGCGTTTTGTAGGGACACGTGCAGGTTATAAGAGTTCGCTTGCTTTTAATACACGAAACAGTACAACAGCTATATATGTGATTGCATTGGTAATAACAGTGGTGGGACTCTCTTACCTTGCTGTTCCTCTTTATCGCCTCTTTTGCCAGGCAACAGGATTAGGTGGAACTGTAAAAAGAGAAGAGGCAGGAGAGAAGATCGAACAAATGGAGAGAATACCTGAAAGAGAGCTGCTTATCAGGTTTAATGCTGATAAGAGTGGTGCAATGCGCTGGAACTTTAGGCCTCAACAGACTGCTGTCAAGgTTGCCCCAGGAGAGACAGCCCTTGCATTTTACACTGCTACAAATCCAACTGATGAGCCAATAACTGGTATCTCTACATACAATGTGGTTCCTTTTGAGGCTGGGCAATATTTCAACAAAATCCAATGTTTTTGCTTTGAGGAACAGAGGCTTAATCCGCATGAACAGgTTGACATGCCTGTGTTTTTTTACATTGACCCTGAATTTATAGAAGACCCAGCTATGGCCAAAGTGGACACCATTACACTGTCATACACCTTCTTTGAGGCTAAAGAAGCTGAGAAACTTGGTTTATAGGAGCATGAATCTTTGGTACTATGAGGagtatttatttcttcatgGGCGGAGTTCAGTTGATGTATAGGCCCAGACACATGGTAAATCATTGGGGTAATATCGCATGATACAGGCAGCTAAACTGCCTCGTGTGCCAACCTCTGATAATATTGTGTGCAATATTGCAGCAATAGAGTCTTTGACTTTCCTTGTCTTAATTATCTTCAACAGTGAGAGCAATCTTTTTCAATCTTAACTGGCAATTTATTTATGTCTCATCAAATGTAAGGCTGCCTAAAAAAAACCTAACGATGCCTGTTAGCCACTCAGCAAATTGATACATTACGTTGCATGTAATGTTGCAATGCATTGTAGAAAAGTCAAAGGAAATAATGCCCCGTGCAATATTATATTGCAGCCATTATGTTGGCTTTAATGCCCCGACTTAATAATGCATGTAAAAAACCTATCATCTTACTGTCATATACATGCCTTGTTTATAAAGCGTTACAACACATGTTAACAAAGAAGTCTAGAATGGCtacttcttttttaaaacaaccaaACACTTCAAGTTctttaaagagaaagaaacctTTGTCTTATCCATCTAATCAGGGAACTTGAGACTCACTTAAGATGGTATCCTTATGTAAAATCATCCTGCATCAATATATTGCATCAATTGAATATACGTGTGATATTGCTTTTTAGAAAAGCCTTCCAAGTAAGTACAGTGTTAAACTTCGTTGATACGGACACTGGACACTGAGATCCACTGAGaaggccatagaaagtgtccatattaacggggtttCCTTATTAACCAGGTTGAATTTaggaaaatgtaagggctttctttctcCAGGGACAAAGTGACTGGTAGATAATTGTGACACAGTAAAGTCTGGTAAAAGAATAAAGTTAGGTGgagttaaaagagaaaagaaattctTAAAAATTGACCTCTGCGCGTCTAGcatttgtttgttcgttttttatGAAAACAGTCAATAAGTATGGCACAGATCCGAAACGGAACAACTGGTAATGTTTCTCTGTATAAAGGAATATTTATAGCACGCAATTTTACGCACGAAATGACATATTTGTATCCAAAGGTTGACGCTCTTCACACGAGACAAAAGGCGTAGTTCAATCATGTGACTGTTTTATAGAAATGATGACGGAGTGTTTCGGAGTCCTTCTCGTCTTGGCTTTCATGAAATGAcatgctacaaaaacaattaacaacaacatatttttaagtATTCTGAATTTAATTGTTTAATATCCTCCAAGTTTTAGAAGTCTAAGAAGTTAAAAGGTGGCAATTTATTCTTGTTGACAAACTTGTATCACGGCcacaaattttggttgtttagtATGAATGAGTGGAACAAGCTGCGTTAAAGAAAGCGTAATAATTCTTCGACTTGTTTTACGTCACAAATTGAAATGTGAAACAAATTTCGAGATTTTTACTTGgtatttttcttatttaatttttggtcaATGGGAGATCTCAAAGTCAATTTAGGAAACATATTAGACAATTCTTAATTTTGAGCTGGAAAAAAAACCCTGTTGCCTTCAAATGAAACCCCTCTCTGGAGGATTTTTGCATGGTCCCACTCGTCTTCAATATTTTAATAAAGGTGTTTTGGATTTTTTTAGTGGTTGAAAGCTTACATTATATTACTTGTATTTCTTACCTCTCGTAAAGAACGTTATCTTCAACTTTTGTAACAGAGAAGCGAGTCCCACAGCTAATAATATCAAAACAATTTGAGCCGTTACCTTTTCAACAAAAAGAAAGTTCTATAGTAATACACTGTAGCAGTAACAAGGTCTCCTTGTCAtctgttttaaatatttttgcgCATGCTTTATAGGGTTACGTAGATTTCATATCTGTCAGGTTAataatatatgaaattcatacatTCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04442 all species →	CtaG_Cox11	Cytochrome c oxidase assembly protein CtaG/Cox11	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007533 all species →	Family	Cytochrome c oxidase assembly protein CtaG/Cox11	Interproscan
IPR023471 all species →	Homologous_superfamily	Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21320 all species →	CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0031304 all species →	Cellular Component	obsolete intrinsic component of mitochondrial inner membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02258	COX11, ctaG; cytochrome c oxidase assembly protein subunit 11	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.