Gene detail

Detailed information of XP_073246940.1 in Porites lutea

Genomic Location: chr1:1876798...1883463
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073390839.1

TATGGAAGCCTGGGTACAAAAACAATATGGCGGCTGAGTTTCCAGAAAGGCGTTGTGTGCAATAATACACTTCCTTCATAAACACATTGAGAGTTCGTCAGATCTTATCGCAAAATCTGTTTGCAGtctatttttatgtttaatgATGGATCTTCTGGGCTCAATTCTGAAGAGTATGGACGCACCTCCGACAACCGAGGTTGACAAAAAGGCAAAAGAGGAAAAAGCCAAACTCAAGAAACTccaaatggaagaaaaaaagaaaaatgctgcTTTTCGTGCAAAGACTGAGAAAGAAGTGACTGAATTCATCAAggatacaaaacaaacaagagtgAAGTACCCGCCAATGACAAGAATCCAAAGAAGTATTGTTCATGACGTTGCAGAGATTGCTGGTCtcacaactttttcttttgggGAAGAGGAAGTTGATAGATATGTTATGCTGTTTAAAAAGgAATTTCCCCCTTCAGATGAAGAACTTGATGCTTACAGAAATGGAGAGGAGTTTGATCCTGAAAATGTAAGCAAATCTAAGGAGCAAGCTAAGAGTATAGATGATAATGCCAGCACTGTTAGCAAAGCACAAAAGACTTCAAGAGTATCTCATTCTCAACCACCTGCCACATATTACAAAGACAAGTATAAACACTTATTAGGAGTTGACAGTGGAAAAGATGCTGCAAGAGCTACCAAAAGTAACTCTGCTTATGGCTACGttcccagtgaaaacaaaagagatctTCGATCAATAGAAGAGACTTTAAATGACATTCGCAAAAGAAAGAAGCTTAAACCTGACGACATTGATGAAGCAAGTGAGCCACACGATTCCAAGGATGAACAGTAATTTGTTACAGGGATAACTCAACCTCTGCTCTAACTGCAGTACTGAACAGTGCAGAATGTAGGGTGGAAGACGATATCTTGCAGTGGGcacttttgtttctttgcaaTGCCTTCCTTGACTCGAATTCGGTATGAGCAGAAGTTGCAATTTTTCCTGGACTGGAATTCAGACACAGAGTTGACAATCATCTCGCGGCGTGAATCAAGTGGATGGGCAGTCTCTTTGTTTGATTTTAGAACACTCAGAACCGAATTTTGTTCGAATTTaagaaagcaacaaagtttaaaaggttacaaacatTACACTGGATTTTCAAGGAGACTGAAAGCTCCTCGAATTACATATAATCcctgaaaagttatttttctccttggaattagactacgagcaggctcctttttttctttacaaagttACTCCACACGTAACCCATGcaagcgagcggcgaagccgcgccAACGAGTTTATTGTAACGTCGTTGTTTGCATTCGCGCTGGCTGAGAAAAGAACTGGTCcccggattttaagagaaaatgcgGACGGTAAGCAGTTTACCATGGGATGTTCAATGTATTTTCCTGGTGAGATGTGGCAGACTGAGAGCAACGCTACGTAGTTTATTTCCCACAGTATTCCTTTTTTCTAGCGTTAGCCAGGTCACGAATAACTGTGAAAATAATTGATACATTGTAGGAGATCGCAAATGATTTGTTTGACGCGCTGAAATTATATGGACCAGTAGTACatgtaccctgcgagcagagtctccttcgatggTAACATGAGATCAATATGACAGCATTTTAAAGTGATCCCTAAAAGTTTAAAACTTGTTCAAGATTAAGCTAAACACTGTAAAGAAATCTAAGGCGAAGATATTTAGAATTTTTCATGATATTGATAAAAGGCCTAAAGAAATTTCCACGGCCTTTGCAGAAAGTTCAGATGCTTTTGTtaactttttaagtttttatttctctttctcttgttGATCTGGAAGCTCCAGGGTAAGATCATTTTTTtcatgtaataataattaatggtAGGCTGTAAATTGTACAAGTATCCAgcctaaaatgtttttttctttaattttgggaaaaaataaacttgaataTCGCCTATGTACAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01424 all species →	R3H	R3H domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017330 all species →	Family	Sperm-associated antigen 7	Interproscan
IPR001374 all species →	Domain	R3H domain	Interproscan
IPR034068 all species →	Domain	Sperm-associated antigen 7, R3H domain	Interproscan
IPR036867 all species →	Homologous_superfamily	R3H domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13498 all species →	SPERM ASSOCIATED ANTIGEN 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073246940.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.