Gene detail

Detailed information of XP_073247432.1 in Porites lutea

Genomic Location: chr6:985035...1000319
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073391331.1

CGTCTGACACCAAAGCGAGTCCGTATCAAACCGGTGGGCAGAGACACAGCTGAAAACGTTGCCCTCAGTTTGCCATGAAAACACGAGCAATCGCTCACCAAAATGGATGTCCTGAAAGATTTAGAAACGAAAACGGGACAGGAGCTACATAATATAACTTTAGCGACTTACCAGATGTCCGGCAAGCGGCGAGCGCCTTTCACGATTCTCTCGCCAAAATATCAGAAAAGGCGCTTTCTTCAGAGGGAACGGCTCACAGCCTTGGGGATCCAATCAGGGATTTAGTATCTGTCAGGAAGGACATGGAAGCAAGACATGTTAATGTGATGAAataccttcagaatgacttaATAACCCCATTAGAGCGACTTGCTGAATCAGATGTGTTATATGTTAAGTCTTTTCAGAAGAATTATGGTCAAGAGAACAAAACCAAAGTGGAGTCAGTGGATAAAGCTAAAGGTGAACTGTTGaaggttagaaaaaaaagtcaaagaaaaaagccaacagaaaaatatgaagatAAAGAGAAACAGTGTGAAGAACAGGTAGCATCTTGTCAAAAAGAACTTCATGAATTTCGGCTTACAAGTTGCAGAAAGGCAATGgctgaagaaaagaagagataTTGTCTTGTGTTGGATAGAACAAGTATAGTTGCTAAGAGTACTATGGAATTCTGTGAACATAATTCCCAGATACTAAGGGAAAAAGTTCCTATGTGGTTCTCTCATGTTAAAAGGAAAGGTGACTCAGCTGATTTCCAGATTAATGGATCTGTCATGAATGCAGAGATGGAAAATTTGGGGAGAAGTAACAAGGTAGAACTGAGAGCAAAGTTTATCCACACTGCTGTAGAACCATCACAACTTAGTTTTAAAGAGGGTGATCTGATACATCCCATCAGTGAAGTTGTGTCGGGTTGGCAGTATGGAGAGAACTTGAAAACTAGCAAATCTGGTTGGTTTCCTGCTGCTTACACTGAACAGGTCATTGCTGTTTCAACTGGTCCTACAGTAAGTCACACTCTTCCAGCTGGCGGAGTTCACCCTCGCCCTCCACTAGAGACCAGCATAAGCCATAAGTCACTGAAGCGTTATTCTAGTACGGGACCTGATACTCTGCACCTACCTCCACCAGACTACGCTGATGTGGATAGCAAAGCTGAAAATGAACAGACATCGTCTTCAGATACTCCAGAGATATCAGATAACCAGCCGAGTACACTAACAGTAACGATCTCGCCTACAGCTTTGAATGGAAACAAAACATCGCCAGTTCCACcaccgccccctcccccaccccctcctacTGTCACGCTCCCAGAAGAGAACGACGACCGGGAAAAACGCAGTATGGATCCAAATGACGCTGTGACGAATAGTTCATCTGATGTGAGCCATTTTTAATCAAGCTGCAAAGGACTTCCTTGTCATCTGCACGACATAGAGTTGCCTGACAGAAACCTAAAAGTTTTAATTGCGACTAACAAGGAATAGCAAAGAAAAACTAGTATAGATCTTAGTACATGTAGCGCTAATGAATattgtattgaaaaaaaaattgatgatttCAGAAGTACTAGTTTATATGTACAAACCATGTGATTTCATATTTAATTACGCAGATTAAATTATTGATCCATGTACATATACCAACAATATACCAAGCGAATCTGGCTGGAATTATTTTATGAAGAAGCCAATAATAtattgtagaggaagtattttTGTGAACTGTAAATGTAAAGACGCTTACGAATGAGGATGCTTCAGTTGATGTTGTGCTACTCATGAGACTTTCTTATGATAAACACAACttttgaataaaacaattatGATTTGAATTTGGTTTTATCCGGTTTAATAATAATTGTCTTAAGTTTATTTCTTACGTTTTCTGAgctctttttttgtattaaaaagatgtaaaatattCTAGTTCATTGCTTTATTTTTGCGCTTCCAACTGATTGACTTATGGCTGCTAAGTCTCTTGGTAGAAAGAAGAATGTATTTTGCACTGTTTATGAAAAGTGAATTATTTTAAAGGCCGTGAAATATCTTGGGAGTGATTTGTACAATTATAATTAAAACTAACGTTAAAACAA

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF08397 all species →	IMD	IRSp53/MIM homology domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR027681 all species →	Family	I-BAR domain containing protein IRSp53/IRTKS/Pinkbar	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR013606 all species →	Domain	IMD/I-BAR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14206 all species →	BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030838 all species →	Biological Process	positive regulation of actin filament polymerization	Interproscan
GO:0051017 all species →	Biological Process	actin filament bundle assembly	Interproscan
GO:0051764 all species →	Biological Process	actin crosslink formation	Interproscan
GO:2000251 all species →	Biological Process	obsolete positive regulation of actin cytoskeleton reorganization	Interproscan
GO:0007009 all species →	Biological Process	plasma membrane organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073247432.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.