Gene detail

Detailed information of XP_073247523.1 in Porites lutea

Genomic Location: chr7:13433700...13447244
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140942509

ATGGATGATGTTTTGAGTAGTCACGCCGTTGTTTCAACTCGGCCGCCGAAAATTCCGATGGCCCACTCAAAAAGGCATTCATTGCATTCTGGAGAGTCGATCACCAAGTTTAACAAACTCAAGAAACATGCCAGTCAGCCCAAGCTTCGAAGAGATGTGCTTACTGGATCTCTGACGAGTTTAAACTTGGATAGTTCGAAAAAGTATTCCAGTTTAGCTCATATCAACTCACTCAAAGGTACTGCAAAAACTCTGAGTGCCAGCAATCTTGCGGCTGTTTCGGACTCGAATCTATCCCTCAAGGAAGCTATGCCAATGCGTAGCTACGATCAGCCTAATTCGTCCTATTCCGAAATGAAGAGCCATTTTGAAGATTTAGTGAAATGCTACTACAACCAGCTTACCAAGGGCTGTGGAAATAGCAACTGTAAAAACAAGTTTTGTTTTTCCTGCAAGGACGGAGTGCGATTCACCCCTGATGTTGCTGGAGTGATGAGCATAGAACTGGCCACAAGAAATAAAAAGCACATTTGTGTTCCTGAGAACCGAAGAAATGATCCTTTACCTAGCAATCTTTTTGTTGGAGAGCCTAGGCGTGCGAGGCCATTTCTGCACTGTCTTTTCTCAACAACACCATTCAAATCACTTTTCCAGCCCAGCCCTCCAAGAAGAAACTCCGAGGGTAATTTTGCTTTACCAAACCATCACAGTGAGTCTAAGAAAAAGCAAGCGAGTGGATCTTTTGATCAAAGAAATTTCAAAGCTGAATTAAGTGATGGTGGAAATGTTGAGAAAACTGGCAAAAGAGGGTTAAATGTTCCGTCATCAGATGTCAAAGATGACTCAAAAAGACATGTTTTTACTCTCGATAGTACAGAATTTTCTAAATTGAATCTGTCTGGTAATCGTGTTCATGAGCATACACTTTCAGGAATGCCACCTGAACTTTTCAGCTCAAACAGCTCGTTAAATGACCTTATTGATTTGGAAGAGTTTGAGAAGGAATGCGCTCTTGAGATGTCATCAAGTCATATTCAAGAGTTTTCACTAACTCATCTAACACTACCAATGCTTGAATCTTCGGTCCAAAATTACAAGGAGTGTAAAGATTCAGCTTTTCTTATCAATACCATCAGAACAGTATTCACATCATCTGAGGCCTTGAATGAAAGTTTTAGGACATCTAAAGGTGATGGCCGTGATTCTCTTGATGTTTCTGCTGTCAGGGAAGCCTATGCTCTTCTTTTGGGTTTGGAGCCTAAAGACACATTTGTTCAACCACTAGTCAATTCCTTAGAAATTCATCTCGCTGCTCTAAGCTCAGTTATTATGAACCCAGATGAGGTTTCACAGCTGGTTATTTTACTGGAAAATCCCCTTGTCCAGGAATCTCAAGCTCTTTTACGAAAACTTTGTCAAGTGATCAGTCACCTTCCTGCTGACTCACGGCAATCACTGATTGCAATCTTTATGAGCTATGATGCAGAATCATTTAAGCAGTTACTTCAGGTTCTTCAGGAATACTTGAGTAGCATGATTTCTCCTGGACAGCGCAGCATGCAACACTTGTTAGAAGCTTGTAAATCACTGGCTATACTCTATGATGCCTGCCGTCAGCTCAACAGGAGGAACAGAGAGGACTTCATTTCCCTTTCTGAGTTTTATAATGAAGATCTCTCTCTCAAAATGGATTTCAAGAAGGAATATGAGCACTGGAGAAATTTAAACTCCACCAAAAGTTTGGAAAGAGACCAGAATCTCTCTCTTCTCGATTATCCATTTTTTCTGGATCCAACCTCAAAGGTTCGAGTCTTGAAGATTGATGCCGTATCACAGATGAGAGTGGAATACCAAAATGCAATAGTGCACCAAGCACGTGTACAGCAGGCGCAGAGAATACGAGAGGAGGTCGAGAAAACACAAAATGATCTGGAAGATGCAGTTAAATCTGCCATATGCCCGTTTCTTGTTCTTGAAGTCCGCCGTGATCATCTGATTGAAGACACATTAAATCAGATCCACCTCAAGGAGTTTGACCTGAAGAAGCCCCTGAAGATCAAGTATGTCGGCGGAGGAGAGCAGGGGCTGGACATGGGAGGACTACAGAAAGAATTCTTTCACATGATTGTTGAAGCTGTTTTTGACCCGGGCTACGGCATGTTTACTTACATCGAAGAGAGTCACAGTGTGTGGCTAAACAGCTCGTCTCTTGAATCAGAGAAAGAATTTGAGCTGGTCGGGATCTTGCTCGGTTTGGCCATCTACAATGGAATCATATTAGATCTACATTTTCCGCCTGTGATTTATAAGAAGCTTCAGAACGAGAAACTCGATCTTCAAGACTTGTTGTTGGGCGTTCAGCCATCCCTGGCAAACAGTCTCATGCAGCTGTTGGAGTTTGATGGTGATGTGGAGGATACGTTTTGCTATACATTTCAGGTCTCCTCAAGCGAGTTTGGTAGCCTCCAGAGCGTGGAACTTCTTCAAAATGGAGAGAACATTCCTGTGACAAACTACAACAGGGAACAGTTTGTTTCATTGTACGTGGACTACCTCCTTGTGAAGTCGGTTGAAAAACAGTTCAGTGCTTTTTCGCGGGGTTTTCATAAGGTTTGTGGAGGTGAAGCTCTCACTTTGTTTCGTCCTGACGAGCTTGAACTCTTAATTTGCGGCTGCCCTGTTATCGACTTCTACGAGCTTGAAATAGCAGCAACCTATGAGGAGGGCTATGATCACAACCACCCTACGATCAACGTGCTCTGGAGCGTTGTTAATGAAATGACTTTGCAGCAGAAGAAGGCTTTCCTTATGTTTGTCACCGGAAGTGATCGGGTGCCTCTTAAGGGGCTCGCGAACTTGACCTTCATTGTTCAACGACACGGCGAGGACTCGGACCGACTTCCGACCGCTCTGACCTGTTTCAATCGCCTTCTGTTGCCGGCATACAGCACCAGGAGTAAGCTAAAGGAAAGGCTTATCGTTGCAATTGAGAATTGCAAAGGTTTTGGCTTAACTTGA

Transcript

rna-XM_073391422.1

AACGAAAATGGCGGCGTTTTTGTTCTGGAATGAGTGACGAAGAAATAACGCAAACCGCCTGTGAAAGTGTGAAAATGTACAGTTACGAGGTTTCGCTCAAAAGAAACCgtcctgttttttgtttttgatgtaCAAGAAATaatcttgttgtttttgtcGGAAGGAGAAGGGAGGAGATTCGCTGAGTATGGATGATGTTTTGAGTAGTCACGCCGTTGTTTCAACTCGGCCGCCGAAAATTCCGATGGCCCACTCAAAAAGGCATTCATTGCATTCTGGAGAGTCGATCACCAAGTTTAACAAACTCAAGAAACATGCCAGTCAGCCCAAGCTTCGAAGAGATGTGCTTACTGGATCTCTGACGAGTTTAAACTTGGATAGTTCGAAAAAGTATTCCAGTTTAGCTCATATCAACTCACTCAAAGGTACTGCAAAAACTCTGAGTGCCAGCAATCTTGCGGCTGTTTCGGACTCGAATCTATCCCTCAAGGAAGCTATGCCAATGCGTAGCTACGATCAGCCTAATTCGTCCTATTCCGAAATGAAGAGCCATTTTGAAGATTTAGTGAAATGCTACTACAACCAGCTTACCAAGGGCTGTGGAAATAGCAACTGTAaaaacaagttttgtttttcctgcAAGGACGGAGTGCGATTCACCCCTGATGTTGCTGGAGTGATGAGCATAGAACTGGCCACAAGAAATAAAAAGCACATTTGTGTTCCTGAGAACCGAAGAAATGATCCTTTACCTAGCAATCTTTTTGTTGGAGAGCCTAGGCGTGCGAGGCCATTTCTGCACTGTCTTTTCTCAACAACACCATTCAAATCACTTTTCCAGCCCAGCCCTCCAAGAAGAAACTCCGAGGGTAATTTTGCTTTACCAAACCATCACAGTGAGTCTAAGAAAAAGCAAGCGAGTGGATCTTTTgatcaaagaaatttcaaagctgAATTAAGTGATGGTGGAAATGTTGAGAAAACTGGCAAAAGAGGGTTAAATGTTCCGTCATCAGATGTCAAAGATGACTCAAAAAGACATGTTTTTACTCTCGATAGTACAGAATTTTCTAAATTGAATCTGTCTGGTAATCGTGTTCATGAGCATACACTTTCAGGAATGCCACCTGAACTTTTCAGCTCAAACAGCTCGTTAAATGACCTTATTGATTTGGAAGAGTTTGAGAAGGAATGCGCTCTTGAGATGTCATCAAGTCATATTCAAGAGTTTTCACTAACTCATCTAACACTACCAATGCTTGAATCTTCGGTCCAAAATTACAAGGAGTGTAAAGATTCAGCTTTTCTTATCAATACCATCAGAACAGTATTCACATCATCTGAGGCCTTGAATGAAAGTTTTAGGACATCTAAAGGTGATGGCCGTGATTCTCTTGATGTTTCTGCTGTCAGGGAAGCCTATGCTCTTCTTTTGGGTTTGGAGCCTAAAGACACATTTGTTCAACCACTAGTCAATTCCTTAGAAATTCATCTCGCTGCTCTAAGCTCAGTTATTATGAACCCAGATGAGGTTTCACAGCTGGttattttactggaaaatccCCTTGTCCAGGAATCTCAAGCTCTTTTACGAAAACTTTGTCAAGTGATCAGTCACCTTCCTGCTGACTCACGGCAATCACTGATTGCAATCTTTATGAGCTATGATGCAGAATCATTTAAGCAGTTACTTCAGGTTCTTCAGGAATACTTGAGTAGCATGATTTCTCCTGGACAGCGCAGCATGCAACACTTGTTagaagcttgtaaatcactggCTATACTCTATGATGCCTGCCGTCAGCTCAACAGGAGGAACAGAGAGGACTTCATTTCCCTTTCTGAGTTTTATAATGAAGATCTCTCTCTCAAAATGGATTTCAAGAAGGAATATGAGCACTGGAGAAATTTAAACTCCACCAAAAGtttgGAAAGAGACCAGAATCTCTCTCTTCTCGATTATCCATTTTTTCTGGATCCAACCTCAAAGGTTCGAGTCTTGAAGATTGATGCCGTATCACAGATGAGAGTGGAATACCAAAATGCAATAGTGCACCAAGCACGTGTACAGCAGGCGCAGAGAATACGAGAGGAGGTCGAGAAAACACAAAATGATCTGGAAGATGCAGTTAAATCTGCCATATGCCCGTTTCTTGTTCTTGAAGTCCGCCGTGATCATCTGATTGAAGACACATTAAATCAGATCCACCTCAAGGAGTTTGACCTGAAGAAGCCCCTGAAGATCAAGTATGTCGGCGGAGGAGAGCAGGGGCTGGACATGGGAGGACTACAGAAAGAATTCTTTCACATGATTGTTGAAGCTGTTTTTGACCCGGGCTACGGCATGTTTACTTACATCGAAGAGAGTCACAGTGTGTGGCTAAACAGCTCGTCTCTTGAATCAGAGAAAGAATTTGAGCTGGTCGGGATCTTGCTCGGTTTGGCCATCTACAATGGAATCATATTAGATCTACATTTTCCGCCTGTGATTTATAAGAAGCTTCAGAACGAGAAACTCGATCTTCAAGACTTGTTGTTGGGCGTTCAGCCATCCCTGGCAAACAGTCTCATGCAGCTGTTGGAGTTTGATGGTGATGTGGAGGATACGTTTTGCTATACATTTCAGGTCTCCTCAAGCGAGTTTGGTAGCCTCCAGAGCGTGGAACTTCTTCAAAATGGAGAGAACATTCCTGTGACAAACTACAACAGGGAACAGTTTGTTTCATTGTACGTGGACTACCTCCTTGTGAAGTCGGTTGAAAAACAGTTCAGTGCTTTTTCGCGGGGTTTTCATAAGGTTTGTGGAGGTGAAGCTCTCACTTTGTTTCGTCCTGACGAGCTTGAACTCTTAATTTGCGGCTGCCCTGTTATCGACTTCTACGAGCTTGAAATAGCAGCAACCTATGAGGAGGGCTATGATCACAACCACCCTACGATCAACGTGCTCTGGAGCGTTGTTAATGAAATGACTTTGCAGCAGAAGAAGGCTTTCCTTATGTTTGTCACCGGAAGTGATCGGGTGCCTCTTAAGGGGCTCGCGAACTTGACCTTCATTGTTCAACGACACGGCGAGGACTCGGACCGACTTCCGACCGCTCTGACCTGTTTCAATCGCCTTCTGTTGCCGGCATACAGCACCAGGAGTAAGCTAAAGGAAAGGCTTATCGTTGCAATTGAGAATTGCAAAGGTTTTGGCTTAACTTGATGTCCGTGTGAATTAAGTTAGGGATGACGAATCTGATGCAAGAaacttgtaaaaaaaagaaactaacgCGTGGGCGGCAAGCTTTACCctaaactgttcacagtcccctatctTTCCGtaagatcgagcgctttgcgttacgggtgGCCTTCTTGGATGCAGTGAGCATCAAATAttataagggggagggggacggTTTGGGAGTGGCCTCCCTGCCCCTCGGTACTGCgtacatatgaaaccaagatggccgctcgtaccggtaagcgctcgatcctgacgatcttacgaaaaaaatAGGGGACCTTTGAACAGTCTAGCTTTTCCCCATTAGACCATGAATCAAAACAGGTAAATTATGAATCTGTAAAATTATGCCACGATTACCTCTCATTGTCTCATTAGGTGTGGGAcagctagtctgctacacagccgtttttagcgtcgtcacgcaacgctcctctctcgttgcgtgacgaccctaaaaaTGGCTGTAGCAGACTATGGAATAGCTTGCTTGCGTCAAAAAATGACAGCCGTTCTTAGTACATAAAAGCGTCCATGGACGGAACGGTAGCAATgtattttgtaaaaattttcaACCGTTCCCTAGTATACAGCTATCATTACTTTGCACGGAAAAGTGTGCAGAACGCTAAGATTTACAAGGGTGTGGCCGACAAGAGCTTGTGGCCTAAGTTATTTATTTACGACGGAACGCTGATAACAAATAATGATTTGATTTTGAGCACAATTGAAGGTATTAAAATTGCTTGGCGAGACCAACTTACCCTGGCTTAAGAGGTCTGTTCTCTAAATATCTGGGATGAAATAACCTTTTGTGCGCGCACGGTTTGATATGAGAGCTCTCTTGTCTCGGCGCTTCGCCGCGAACTATCAGGAATtagggaagaagaaaaagaacctcTAGCAGCCAGGGTAAGACCAACTGTGATTTACTTGTCCAATAAGGTGTAAAAGAGTTGACGGCTCCTTAAAAACATgtagaaaatgtaaaaataagagGATGTTTTTAACAGTCAGTTTGTACCAGGACATTTTATATTTCAATGGTGAATGTTtaattattacatgtaaatgatgTCGCAAGGTTTTGggacaattttattaaattattcACCCAATACTATgatgtaataaaaaaacattttggttaAAGGATATATGTTATCTATTAGAGCTTTTCACATACGTTCTCACCGAAGAGCTCGCGAAATTTTGCGCCGTTGGACTCAAGCGAGTCACACGTCGTTGGTTAAGAGGGAAAAACTCCGTCACAATCCATGGGCTTGcaggaaaattacattttacacAGGAGACGAATctgagaaaatattatttctgaCGGATGAGAGCTTGCGAAAGAGGTCGAcagaaatattttgttagtttcCACATGTTCCAGTTTAGTCTCCCagagaggcgtttattttcTCCTCCTCCCCCGGCTGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan
PF16558 all species →	AZUL	Amino-terminal Zinc-binding domain of ubiquitin ligase E3A	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042556 all species →	Homologous_superfamily	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamily	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR044611 all species →	Family	Ubiquitin-protein ligase E3A/B/C-like	Interproscan
IPR032353 all species →	Domain	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45700 all species →	UBIQUITIN-PROTEIN LIGASE E3C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073247523.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.