Detailed information of XP_073247906.1 in Porites lutea

Genomic Location: chr7:15208805...15233979
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00636
all species →
Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF00270
all species →
DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF20931
all species →
Dicer_platformDicer, platform domainDomainInterproscan
PF20932
all species →
Dicer_dsRBDDicer, dsRNA-binding domainDomainInterproscan
PF20930
all species →
Dicer_PBDDicer, partner-binding domainDomainInterproscan
PF02170
all species →
PAZPAZ domainDomainInterproscan
PF03368
all species →
Dicer_dimerDicer dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999
all species →
DomainRibonuclease III domainInterproscan
IPR036389
all species →
Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR014720
all species →
DomainDouble-stranded RNA-binding domainInterproscan
IPR011545
all species →
DomainDEAD/DEAH box helicase domainInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR038248
all species →
Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR048512
all species →
DomainDicer, platform domainInterproscan
IPR003100
all species →
DomainPAZ domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044441
all species →
DomainDicer, double-stranded RNA-binding domainInterproscan
IPR048513
all species →
DomainDicer, partner-binding domainInterproscan
IPR005034
all species →
DomainDicer dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950
all species →
DICER-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004525
all species →
Molecular Functionribonuclease III activityInterproscan
GO:0006396
all species →
Biological ProcessRNA processingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0030422
all species →
Biological ProcesssiRNA processingInterproscan
GO:0031054
all species →
Biological Processpre-miRNA processingInterproscan
GO:0016891
all species →
Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0004530
all species →
Molecular Functiondeoxyribonuclease I activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006309
all species →
Biological Processapoptotic DNA fragmentationInterproscan
GO:0016442
all species →
Cellular ComponentRISC complexInterproscan
GO:0090501
all species →
Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11592DICER1, DCR1; endoribonuclease DicerEC:3.1.26.-
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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