Gene detail

Detailed information of XP_073248026.1 in Porites lutea

Genomic Location: chr1:4060868...4117374
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140942904

ATGGGAAAGAAGAAAGCAAAAGAACCAGAGACTCCTGCGAAAGATGAGTTCGACCCCCTGGATATTGTTAGCAAGAAGCCCCATACAGTTGTTCTTATGTTAGACTCTCCAGAAGAACATGTTCTTCAGTCAGCTTGTGAAGCGTTGTACAAGTTTGCAGAAAAATGTGATGAGAACAGACAGGAGCTTTTGAATCTCGGAGCACTGGAACTTCTGTTAAAACAGGTTTCATCAGAAGACAAGGTTGTCAGAAGGAATGCTACCATGTGTCTTGGAACTATGGCTCAAAATGCAAATGTTAAAAAAGAACTCCGGAAATTGTCCAGTATTCAGCCACTGGTAACACTGCTTGGACCTGATGAGGATGTTTTATGCCATGAATTTGCGAGTTTGGCACTTTCATCTATGGCAGCTGAGTTTTCTTGCAAAGTGGAGATATTTGAACAGGGAGGCCTGGAGCCCATCATAAAACTTCTTTCCTCCACTGACTGTGATGTGCAGAAAAACTCAGTCGAAGCCATTTCACTGCTAGTTCAAGATTACCACAGCAGATCTGCCATACGAGAAATGAATGGGTTGCAACCTCTTTTGGCATTGCTAGATTCAGAGTATGCCATCATTCAACAGCTGGCACTGGAGAGTTTGATCCAAATTACACTTGATGCTGATAACAGAGGAGCTTTGAGGGACCTTGAAGGACTTGAAAAACTTGTTGAATTTGTTGGAAATAAGGAATATGAGGATTTACATGTGCAAGCTTTGCAAGTTTTGTCAAACTGTCTTCAGGATGTAGAGAGTATGCAGCTTATTCAGACCTCTGGTGGATTACAAAAACTTCTTGCATTTGCTGCTGAGTCCACTATTCCTGAAGTCCAGCAGCATGCGGCAAAAGCTATAGCCTTGGCAGCAAAGAACGGTGAAAATCGAAAGATATTCCATGAGCAAGAATGCGAGAAAACATTGATAACACTTCTTGCTACCGATAACCCTGGGGTCCAGGCCTCAGCATCTTTAGCTCTGGCAGTTATGTCCGAGAATCTCAGCAGTAGAGACGTGGTAGGAAAACTGGACGGTATTCCGCCATTAATTAATCTACTCAACAACGACAACCCTGATGTAAAAGAAGGCGCAACACTCGCTCTGGCGAACATAACCACGGCTAACAACACAAATTGCGGTGACGTGGTAGACAAGGGAGGTGTTGAACCGCTTATCACTCTTCTGAATGACCCCAAGCAGCTGGTTCAAGCCAATGCTGCTGTGTGCCTCACCAATCTAGCTACTGAAGAGTCTTGGAGATCCGAGATTCAGCAGAGAGGAGTTGTTCCAGCTCTTGTCCAAGCGTTACAGTCTAATGCCGCAATAGTACAAAGTAAAGCTGGAATCGCTGTGGCTGCCTTCGTGTGCGACGCTGACTCAAGAAATGAGTTCCGCGCGGAAGGTGGCCTTCCTCGTTTGGTTGAGTTATTGCGTTCAGGCAATGACGATGTAAGACGGAGCGTGGCCTGGGCCGTGCTTCAGTGTGGTAACGATTTACCAACCGCTACGGAGATTTGTAGACTGGGTGGTTTGGATGTGCTAGGAGAGATTTCATTGTCCAGTTCCCGCCAGTCTGGTTTTGCGAAAGCCGCCATGGAATGTCTACTAGACAGTAACCTTCCCGCAAAGTACGCTCTGACAGGCTGTCTAAGTTCTAACAACATCATACAGGATGGATTCTACGATTGTGGACCGATTCGCCCTGATAGCAGGTTCTTGACACTTGAGGAGCTCAGTTCACAGCCAACAGATGCTCACCGACCGATAATTCTGGTCAACTCCAAAAACCCCGAAAGAAAAACTCCTTCGCCAGTTCTCGCTCCCAAAGAGCCAGAAAAAAGCCCAGAGAGACTCGCAAAGGGTTCAAAATCCAGCAAAGACTTGAAGAGTAAAAGTAAGATCGTGCGTGAACGAGAGGAGCAAAAACAAAAGGAAGAAGAGGCCGCTTTGTCCGAGGTCTCAGCCACGCAACAAGAGGAGGTACCCACCTGGCAGCCCCCTACTGATGAGGTGCTACATGGTTATATTGAGGAGGTTCGGAACACTATCCAACCCCTTAGCAGCAGTAGCGAGCAGATAGTAGCACTTGCAAGCTTTGTCAGTGATAAGATGGGCGGCTCTGTGGACCGAGAATCGCTATCAACGTTTAGTTATGAACTACCCATTGGTCAACTAAAAGTCGAACTGAACTCCAATATCATTCCTATTGGCAAGATACAAACCGGAATATTTTATCACCGAGCTTTGCTTTTTAAGGCTCTTGCAGACCGCATTGCTCTGAGCTGTTCGTTGGTTCGAGGAGAGTACAATAGGGCCTGGAACGAGGTGATGCTTTGCGATGAAGCACAGGATGGTCAACCTAAGTTTCCTCCTAAAACTTACATTGTGGATCTGATGCACCTCCCTGGCAGACTTATGAGTACCGACTCGCCCGAGGCCTCTCTCTACCAAAGGCTCTAG

Transcript

rna-XM_073391925.1

TGTAGGTAAAATGGCGGCGATTTTGTAGTAGAAATCCCACAATATCTTTGTGTGATTAAGGGTATTAATTTGCCTCCAAAACAAGTAAGATTGTCGTCGAATTATGGGaaagaagaaagcaaaagaaCCAGAGACTCCTGCGAAAGATGAGTTCGACCCCCTGGATATTGTTAGCAAGAAGCCCCATACAGTTGTTCTTATGTTAGACTCTCCAGAAGAACATGTTCTTCAGTCAGCTTGTGAAGCGTTGTACAAGTTTGCAGaaaaatGTGATGAGAACAGACAGGAGCTTTTGAATCTCGGAGCACTGGAACTTCTGTTAAAACAGGTTTCATCAGAAGACAAGGTTGTCAGAAGGAATGCTACCATGTGTCTTGGAACTATGGCTCAAAATGcaaatgttaaaaaagaactCCGGAAATTGTCCAGTATTCAGCCACTGGTAACACTGCTTGGACCTGATGAGGATGTTTTATGCCATGAATTTGCGAGTTTGGCACTTTCATCTATGGCAGcTGAGTTTTCTTGCAAAGTGGAGATATTTGAACAGGGAGGCCTGGAGCCCATCATAAAACTTCTTTCCTCCACTGACTGTGATGTGCAGAAAAACTCAGTCGAAGCCATTTCACTGCTAGTTCAAGATTACCACAGCAGATCTGCCATACGAGAAATGAATGGGTTGCAACCTCTTTTGGCATTGCTAGATTCAGAGTATGCCATCATTCAACAGCTGGCACTGGAGAGTTTGATCCAAATTACACTTGATGcTGATAACAGAGGAGCTTTGAGGGACCTTGAAGGACTTGAAAAACTTGTTGAATTTGTTGGAAATAAGGAATATGAGGATTTACATGTGCAAGCTTTGCAAGTTTTGTCAAACTGTCTTCAGGATGTAGAGAGTATGCAGcTTATTCAGACCTCTGGTGGATTACAAAAACTTCTTGCATTTGCTGCTGAGTCCACTATTCCTGAAGTCCAGCAGCATGCGGCAAAAGCTATAGCCTTGGCAGCAAAGAACGGTGAAAATCGAAAGATATTCCATGAGCAAGAATGCGAGAAAACATTGATAACACTTCTTGCTACCGATAACCCTGGGGTCCAGGCCTCAGCATCTTTAGCTCTGGCAGTTATGTCCGAGAATCTCAGCAGTAGAGACGTGGTAGGAAAACTGGACGGTATTCCGCCATTAATTAATCTACTCAACAACGACAACCCTGATGTAAAAGAAGGCGCAACACTCGCTCTGGCGAACATAACCACGGCTAACAACACAAATTGCGgTGACGTGGTAGACAAGGGAGGTGTTGAACCGCTTATCACTCTTCTGAATGACCCCAAGCAGCTGGTTCAAGCCAATGCTGCTGTGTGCCTCACCAATCTAGCTACTGAAGAGTCTTGGAGATCCGAGATTCAGCAGAGAGGAGTTGTTCCAGCTCTTGTCCAAGCGTTACAGTCTAATGCCGCAATAGTACAAAGTAAAGCTGGAATCGCTGTGGCTGCCTTCGTGTGCGACGCTGACTCAAGAAATGAGTTCCGCGCGGAAGGTGGCCTTCCTCGTTTGGTTGAGTTATTGCGTTCAGGCAATGACGATGTAAGACGGAGCGTGGCCTGGGCCGTGCTTCAGTGTGGTAACGATTTACCAACCGCTACGGAGATTTGTAGACTGGGTGGTTTGGATGTGCTAGGAGAGATTTCATTGTCCAGTTCCCGCCAGTCTGGTTTTGCGAAAGCCGCCATGGAATGTCTACTAGACAGTAACCTTCCCGCAAAGTACGCTCTGACAGGCTGTCTAAGTTCTAACAACATCATACAGGATGGATTCTACGATTGTGGACCGATTCGCCCTGATAGCAGGTTCTTGACACTTGAGGAGCTCAGTTCACAGCCAACAGATGCTCACCGACCGATAATTCTGGTCAACTCCAAAAACCCCGAAAGAAAAACTCCTTCGCCAGTTCTCGCTCCCAAAGAGCCAGAAAAAAGCCCAGAGAGACTCGCAAAGGGTTCAAAATCCAGCAAAGACTTGAAGAGTAAAAGTAAGATCGTGCGTGAACGAGAggagcaaaaacaaaaggaagaagAGGCCGCTTTGTCCGAGGTCTCAGCCACGCAACAAGAGGAGGTACCCACCTGGCAGCCCCCTACTGATGAGGTGCTACATGGTTATATTGAGGAGGTTCGGAACACTATCCAACCCCTTAGCAGCAGTAGCGAGCAGATAGTAGCACTTGCAAGCTTTGTCAGTGATAAGATGGGCGGCTCTGTGGACCGAGAATCGCTATCAACGTTTAGTTATGAACTACCCATTGGTCAACTAAAAGTCGAACTGAACTCCAATATCATTCCTATTGGCAAGATACAAACCGGAATATTTTATCACCGAGCTTTGCTTTTTAAGGCTCTTGCAGACCGCATTGCTCTGAGCTGTTCGTTGGTTCGAGGAGAGTACAATAGGGCCTGGAACGAGGTGATGCTTTGCGATGAAGCACAGGATGGTCAACCTAAGTTTCCTCCTAAAACTTACATTGTGGATCTGATGCACCTCCCTGGCAGACTTATGAGTACCGACTCGCCCGAGGCCTCTCTCTACCAAAGGCTCTAGTAGTTTTTCGGTTTACGCCTAATAGCATTTTGACGTCGTAGAGTAGTTTTTGCCTTGTAATGTGGCCTTCGCGACTACAATTTCAACTAGTCTCAAAATAGTTCAGATTTATGTCGCGTTATAAACCAGCATTAAATCTTTCTTGGAAGATGGAGAAGAAAAAACGCAGATCAGAGTAGAAAGCCTGAGATTTACAGGAAAAATCTCGTGATAAATGATACCAAGGATTATAGTTTGTACTCAGCCAATCAACTGTTGTATTTGTAGAAAACTTTTCATCCGCCTGTAAATAGTGTATATcaaacatttttgttgtttcta

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00514 all species →	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan
PF14381 all species →	EDR1	Ethylene-responsive protein kinase Le-CTR1	Family	Interproscan
PF13646 all species →	HEAT_2	HEAT repeats	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225 all species →	Repeat	Armadillo	Interproscan
IPR052441 all species →	Family	Armadillo Repeat & Ser/Thr Protein Kinase	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46618 all species →	ARMADILLO REPEAT-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24124	ARMC3; armadillo repeat-containing protein 3	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.