Gene detail

Detailed information of XP_073248131.1 in Porites lutea

Genomic Location: chr7:25507221...25523195
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073392030.1

GTTTGTATTCACGCCGGGGACTGGGTAAGAGTGGACAGCGTGTACTCTCCACTCGACTTGATCCTGACTGTGCAAAATCGAAGATAAATATTTCATATTTGTGAGTCTTTTTCGTCCATCCCTTAGCGCTGCCACATCACAAGAATACTATGGCGGATCCAGTTATCGAGTTCAAAACGCTTTCTCGCAAAGATGCTTTTGAGCGCATGGATAACGAGCTGAAGCTTTTACTTGCCACAGCGCCTGAAGAAAGGCAAGCGGAAGCAAAGTTGCATGTGAAAAGCTTTAAAGAATTGTTTGCAAGGTTTCTTGAGGACACAGGACCATCTGTAGAATGGGAGAAAATCAAGCCACCACCAGAAGGATCTattttaaaatacaatgagATTCCAGTTGCTACAGAGAGTGATATAAAAACTGTGCTTAACAAATTGGTTGTCATTAAGTTGAATGGAGGTCTGGGAACAAGTATGGGCTGCACTGGCCCCAAGAGTCTTATTTCGTTACGTCGTGACTTGACTTTCCTGGACATGAACGTACAACAGATTGAGCATTTGAATAATACATATGGATGTTCTGTTCCTCTTGTTCTTATGAACTCATTTAACACACACGATGAAACACAGAAAACCCTTAGAAAGTACAGCGCATGCAATGTAAAGATTCACTGCTTTAACCAGAGCTGTCATCCTCGTATTGTGAAGGAATCTTTGCTTCCGTTGCCAAGTGTAATGGGAAAGGAACATGGATTTAATGTGGAACACTGGAATCCACCAGGTCACGGGGATATTTATCGCTCCTTTTATAACTCTGGTCTCCTTAAGAAGTTCCTTGATGAGGGCAAAGAATACATGTTTGTTTCAAATATTGACAACCTGGGAGCTACTGTGGATGTTAATATTTTAAATTACATGAATAACCCTTCAAAGTCACCCTCACCAGAATTTATTATGGAAGTGACTGACAAAACAAGGGCGGATGTCAAGGGAGGAACACTCATAGAATATGAAGGCAAACAAAGACTGCTAGAGATTGCTCAAGTTCCAAAGGAACATGTTGATGAGTTCAAGTCAGTCAATAAGTTCAGGATATTTAATACAAACAACTTATGGATGAAGTTGTCTGCAGTCAAGAGAATCGTGGAAGAGAGAAAAATGGACATGGAGATTATTGTAAACAATAAGaCACTTGACAACGGAATGCGCATCATTCAACTGGAGACAGCTGTTGGAGCTGCCATGAAGAATTTTGAAGGAGCTCATGGTATAAACGTACCACGAAGACGTTTCCTTCCGGTCAAAACCTGTTCTGATCTGTTGATTATCATGTCAAACTTGTATGAAATGAAGCACGGCCAACTGGAGATGAGTCATCTTAGACAATTTCCAACTGTGCCCATAGTACAACTCAGCGGCTCACACTTCAAAAAGGTAAAGGACTTCTTAGCGCGCTTTGAGACCATTCCTGATCTCTTAGAACTGGATCATCTGACTGTATCTGGTGACGTCACATTCGGCAAAGGAGTCTCTCTGAAGGGCACTGTTATTGTGATTGCTAATCATGGCGATAGGATCGATATTCCCTCAGGTGCTTTGCTGGAAAACAAGATCGTATCTGGAAACCTCAGAATCTTACAGCATTAGAAACTGCTTTATAGTTtaatctatatatatatatatagtgtaGTTAGGCTTTGTAAGTAGCATAGAAACTGTCCTTATAAAGACCGAAATCAGAATTCGAGGTTTATCTCAAATGTGATTTTCTAGAAAaccattgaaaaacaaatagaacAGCTAAAGAGGCTGAATTTGACTGGTAACACCATGAGATAACGTTCATAAACGTAGAAGGTAGAACTGTAcgctaaataaatagtatcacgtgaaagtactgctgaaagGTTCaactgaatggtcacaccataggattttgtccacagacttaCAGTTATAACCTGTTTTATAGCATTATCAATAGAACCGTGTGAAAATGCTGCTTAGGTTATTCATTTCACTGATCAAAACATAAAGATTTTGTCCACCGCCTCAGAAAATAATTGAGCATAGCGCGGCATGTCTTCATAGATAGACTGTTCCGAAAGATAGCCGAGAACGAGGGCTGTAGACGTTATCTACATAGGGGGTGGGGGACGGTTTGGGAGGAGACCCTGAGGAGGTCTTTCTACCCCCACCGCTATAAAGCCCGACGTTCGCCCCCTCGGAACATTTGCAACCTATTACAAAATGGTTGTCAGTGAAGATGAGCGCTCGACCTCAACCATCTTGCGGAAATTTAGGGACTTTGAACAGTCTATTTTATCAATGGCTTAAATGGTTGAAGGCGTATGGGATACTatcagatatttttaaaatatttaatcaCAAGAAAAGTTCATAACTTAGAGAAATCTATTTTTAGTCATAGAAACCATTAATCTTCGTTCGTAATCAAGAATTATAATGCGATTAAACATGTTACAATCGACCGTAAGAACTCATGTTTCGGGAGAAGGTCTAAAACAGCGCGAATGTGGAAATGTAGACAACAAGGGTTACTAAGCATGGGTAAGGGCaatatggctggatattggccaagtttttTTCCTTGAGGCCcataaaaacgtaaaaaaaaacgaGGCTAGTACCCACCCGTCTTGAgcaaacaagcttggtcaataaatgATTTATGATGTTATTAAaacaaagtcttttcttgcaGGACAAAGCAGGTACTCCCGAGCGGACAAGATAGGCTCATCTTGCCCGCTTGCGGAGTCAGCCATGTATACTCCATATGTAATAAGAGAGTAGAAAGTACCTGAGTCTGTGAAATCAGTACAGCACAGATAATAGGGTACTGAAAGCTCATATGACAGGAAACTAACgtaaaaaggatttgaagaactctcaaacgttttttttttttttgtctaggtAGGAGGCTAGATTGTTTTATGAGGCACACGCGATGAAGTGTCCCGAGACATGCTTTTGTTTGACCGCAGTTGTTAAGCGGCGTCAAAAACGTTCTTGTTCGTTCCTCAAGcgggggcgtagccagcttttcgtggctgactttcatttccacatatcctgaaaactgCATGCATGACTAgtctgacctcaccaacactttgagctcttaagctttttagctcaccccaacaacgcacaatttattacaagcgttagagtgatcaaaccaaacatttgtaggcccgggcctacaagtCTATTGGCTGGCTACGCGCCTGTCAAGTTCTTTTATAGATTTGGGGTTATCATTGTCAAGAAAACTGAAAAGCCGAGCCGTGTTTTCGTTCTTTTTGCAATAGCGTTGTAAATGTTCTGTAGTGTTAAAATAGCTTGTTTAAAGTGGTTAGCAGTCAACAGTACTTCCTAAGTTAATAGTGCTTACAGAGCATTGTGGGTAAGAGAACAAAATATATAGATCATATATAatgcaatgatttttttttattttgtccgcGGCGCCTTTGAAGACTTTCCCGTCTcagacaaaatttttaaaaaagcgcgACAAACCATCCGCATCATTTGTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01704 all species →	UDPGP	UTP--glucose-1-phosphate uridylyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR002618 all species →	Family	UDPGP family	Interproscan
IPR016267 all species →	Family	UTP--glucose-1-phosphate uridylyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43511 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070569 all species →	Molecular Function	uridylyltransferase activity	Interproscan
GO:0003983 all species →	Molecular Function	UTP:glucose-1-phosphate uridylyltransferase activity	Interproscan
GO:0006011 all species →	Biological Process	UDP-alpha-D-glucose metabolic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005977 all species →	Biological Process	glycogen metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00963	UGP2, galU, galF; UTP--glucose-1-phosphate uridylyltransferase	EC:2.7.7.9	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.