Gene detail

Detailed information of XP_073248267.1 in Porites lutea

Genomic Location: chr7:17344671...17361654
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073392166.1

GCAGCGGGCTCTGCAGCGGAAGACCAACCTCGACGACCCTGCAGACAAGGAGCGAAAGATTCAAGAGATCGTTCTGTTACCTCAATCTTTAGAGTTTTACTTTCAAACAAGAAAGATGTTAACAGCAGCGTTTTTTACTTACCTTTCGTTTCTTGCGATGGGTGCAGAGTGCACTGCTGAAGCTAAACACTGGGCTCTGATTGTAGCGGGCTCCAATAGTTGGTATAATTATAGACATCAGGCGGATGTATGTCATGCCTACCAAATTCTCCACAAGAATGGTATCCCTGATGAGAACATTGTGGTCATGATGTATGACGACATCGCTCACAACAAATTCAATCCAACACCTGGAGTCATCATCAACAAGCCTGGGGGAAAAAATGTGTACCAAGGAGTACTAAAAGATTACACAAAAGAGgaGGTGACTCCAAAAAACTTCTTAAACATCCTAAAAGGAAACAAGGAAGCCATGAAGGGCATCGGCAGTGGTAAAGTGATTGACAGTGGACCCAATGATCATGTTTTTGTCTACTTCACTGATCATGGTGCGCCAAACCTTATTGCTTTTCCAGACAGCGTGCTCCATTCACAAGACTTGTTAGAAGCCATCAATTATATGCACGAGAATAAGAAATTTGCCAGGATGGTGTTTTACCTAGAAGCATGTGAATCAGGCTCCATGTTtgtgaaacttgaaaaagatatCAATGTGTTTGCAACCACAGCTGCAAATCCTCATGAATCCTCTTACGCCTGCTACTACAGTAGGAAATACCGGACTTATCTTGGAGATGTGTACTCTGTCAAATGGATGGAAAACTCTGACAAgGTTGATCTCAGTGAGGAGTCTCTTTTGAAGCAATTTGAAATTGTTAAAAGGGAGACAAACACCAGTCACGTTCAGAAATATGGAGACATGGCATTTGACCATGAAGACTTAGATGACTATCAAGGTGATGGACAAGGGAAATCTTCTGGAGTTACACCAGAAGAGTACAGAAGTGAACCAATTACTGATGCTGTTCCTGCTCCAGATGTCCACCTTAACATTCTCCAGAACAGGTTAAAAGATGCAAAATCTGATGAGCAGGAAATGAGAATTGCCAAAGAAATAGAAGATCTAATTGAGCTAAAGGAAGGTATCCGCAGCACAGTGGAAGAGATTGTGAAACACTGCACCTCTTCTGATGAGCAGATGGTCCGAGTTTTGAAAAAGCGTGCTGACCCTGAAGACCTGGTCTGTTACAAGAAAGCTGTCACAGCATTTTCAGAAACCTGCTACAATGTGGGAAAGAATGAGCACGCCCTCCGTCATGTATATGTTTTTTCCAACTTGTGTGAGGAGAAGATACCTGCTCAAAAGATTGTAGCTGCCATTAAGCAGCAGTGTGAGATCCTCATTTAGGCTGAGCATGCTTTGATGGACTCCTAACCAGTTACCAGACCacacaattttattcttttctacTTAATGTCAGCAGTAGTTTTGTTTGAATTAGatcaagttaaaaataaaatcttaaaTAATAAAGACAGCCAAAAGTTGAAACATTTATAATGACTAGATattacttaaccctttaaaccctaacatcaaaattcaaattctcatttcttATCactatacgttttcaatagaagtagtggggagaatttgttgaagtatcaattagattcatcttgtgtgaccatgtccttaattctcatgaccactctgttttataaagcagtggttacaaggagaaatttgatgctgattacTCTTagtgcttaaagggttaaatgaaGTCTAACCCAGGCCACAACTTAAACCATTGGTTCATAAGTTGGGCATTTACAGAACCTCCAACACAAACAGTTATGTTAATGATCCAAAGCAATCTTAAAAGGGTTGTTAAGATTAAAAATCCTGTTTTGGATTGTTGACATCTAGACTTCATCTAATATTATTCAAGTAGAGTAAATGTttcatgttattattattatttttttataaacatttttctttgtattttcacGTTATAAAGGAATTTGGGTGAAAAAAACGCAGAAAAAGTATCTTGGTGTTatgattaataattattaagtgctcattttgtacatgtatttaataCATGCCTGTTCTATAATTAAAACTAATTATATTTACCACACATATTAAGCACTTTGTacaaagctttgaaaaaggTTAAActtgatgtaaaaaaaaactttagttATAGGAAGGATTTCAACACTCACAGGTTTCTAAACCCTTATCATCTTTTCCTTTGAccagcccacttttttaaaaatgtctaaTCTTTCTCAGTAAGTAGGGACAGTGGCCCAGCTGAAACAGCTTGCTTTCTTAGGTACCGCtaagagctttgttttcatgCACAGAAAACCTCaccaaaatgataaaaacaagaaacagaATGACACACTCAGTTTCACTGCCATTAAATCCAGTTGTTCAATATAATTCCAATGCTAGGCTGTCACTGATTCTTTACTTGGAAACTGGGAAAAGTTGACATTTTCTTGTGTTGATGACATATATGTGTTTCTGTCAAGAAATGCATGGTATAGCAGGGGCTCACATTTTTAATATAACAAAAAGGAGATAACAAAAAGTTTTGCGCAGCATCTTACGTTTTAAACATACCCAAAACTGAGTACAACTTGCCTTACAATAATTATTCTACCTTGCTGATATGACCAGTTGACTGAATAATGGATAAGTGAAGAGGTTAACCTGGCAAACACTaaagttttttgcaaaaaaGGGTTAATTAGTGATGTTTGTGTTATCAGGCATATTGACATTCAgaattaaaattgtaaatattattGTTGAGACAGGCTTTGTGTCATAATGCAGCATTACCCAATTTGCATTGCCCAAATGTAGTCATAACAGGGATCCGCAGAAAAAGTAAGAGAGTTGTAGTATTGTAGTCCATAAAAGAAGATACAAgtagagtttaaaaaaattaagctgattctttgattttcattatttttacaaGTTAACGTCTAATAAAGGTAAAGCTTTAGTGTAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20985 all species →	Legum_prodom	Legumain, prodomain	Domain	Interproscan
PF01650 all species →	Peptidase_C13	Peptidase C13 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048501 all species →	Domain	Legumain, prodomain	Interproscan
IPR001096 all species →	Family	Peptidase C13, legumain	Interproscan
IPR043577 all species →	Family	Asparaginyl endopeptidase	Interproscan
IPR046427 all species →	Homologous_superfamily	Legumain prodomain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12000 all species →	HEMOGLOBINASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0006624 all species →	Biological Process	vacuolar protein processing	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01369	LGMN; legumain	EC:3.4.22.34	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.