Gene detail

Detailed information of XP_073248899.1 in Porites lutea

Genomic Location: chr1:6082204...6090153
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073392798.1

ATAATCAACATGGCGACCTCTTGTAGATTTCGCCTTTTTAAAACTCCTTTACGATTGCTAGTTTCAAGGTCCTTTTGCGTGAATGAATCTTCTAAAAGCCATCGGAACTTTCTAACTTTCGATAACAAAGATGTAAGATCCATTTTGAAGAAAATCACGGGTCGCAACTTGGACAAAATCTACTCTGCACGCAAACAAGATCTGACTGTTCCCACATACAAATTAATGACAGATTCCGAGTTTCTACAGgctcAACAAGAAATTGAAGGGAAAGCTGAAAAATTACTTCAAATGCCACCTGTGATGGAAGAACGGCAGGAGATCGATGAAGTGTTGGAAGAAAATAAGGACATAGCTCATTTTTCTGAGACGAGTTATGTCTTCACTGATATTAGTACCAGTGTGTGCAACAGGACCAGGTTAATAACCATAAGAGAGGCAAATGGAAGATTACGAAAAGCCAGGTGGGAGGAAAGGGACAGAATGAATCAGATATACTTTCCGAAACCAGGGAGAAAACATGAAATACCTGAACTGCTAAAAGATGAAAACCTTAAGAGAGTGTTTCAACAGAATCGCCATGAAGATGCTCTTGATCTGACAGTTGTACAGTTTGAGCCTGATTCAGCAGATTATATCAGAGTACATCACAAGACTTATGAAGACATTGTACTCAGTGACAAGTTTGATCTTTTGAGATCAACGAGACACTTTGGAGGACTGGTTTATTACCTTGTAAAGGCTCAAAGAATAATGGAACTAATTGAAGACATGATGACGAGAGACCTTTGGGAAGACTGCGTGGAAGTGGTAAAACTTCATCATCTTCTACATCCCTACAGTAAGATAGCTGAACAAGCAATCAGAAACAATCTTAAAGGATTGTTTATGTTGCGGGCCTACGTTAGAAGGCACGGATCGCCTGAGTCAATGGAGAGATTGGAAGAGTATATGCTTTATAGAGAGAACGAGAAGGCGCAAATTtctaataattaaaatttgtatcATACCTCGAACTTTGTCTTTATTTGCCTCCAGTTGTTTAGAACAACTTCTTTACTCTGCGCATTAATGAAGACAACAGGGGTCCACTATTATTTATTCTCGACTGAGACAAGTCAAGCAAGCACTTGGCAAAAAGAATCTGACCTttaatttcagtcattttttttattaaatacagTTTTCCAATGTATAACAAATTGGCAGAATAACTATTGGCTCCATAAACTGCTTAGGATGCAGCTCTAACTAAAACTGACTTTGCCAGTTAGTTACCTAACATTAACCAATAATTTGCTAAATGGTTTAATTGGCAACACTCCATAAACTTCATCGCTTAAATATTCCTCCATTTCGTCCATCTAATTAAATAATATACTGTTGTCACAAGCTACATTCACTGGTTTTGTTATAATTTCCCATTTTCAAGGGAATCTGCAAGGGCTGTAAGATGTAAAataactagttttttttttttgaaaaatatactgtAATCTTATAACTGTTGATTAGTGCTGCTAGCCCCTAAAAGCCCTACCGGCAAGAAAACAGTTAATTTATTAGGGTAAATACAGAATCATTCATTATAATCtgctaaaataatattattccaATTAACCCTTAAATATTCAATATTGAAATTAGCCTTCTGTAGTATTTGCTAGGTAGAGTCAAAGCTTCACAAAATCCTTTAAATGTGCAGGTTttgtacagatttttggattCCAAACCCAAGACTTTTCCCAGaccttttccaaaacaataatttctttttccagactcaggGTCATCAAGTAGGTGATCTAGAGAGGCcttaaaaaacacaaacacagggCTTTTTTTATGATGCACCGCAAACGTACAGGCAAGGTTGAAAAACAATTGagaccaaaatgaaaaaaatattcacataTAAAGCACTTGctgtaacttttaaaaaactcaagactttttaccatttttccagacttgatctctattttccagactttttcaagggcaaatttcaagacttctTCAAGAAAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10245 all species →	MRP-S22	Mitochondrial 28S ribosomal protein S22	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019374 all species →	Family	Small ribosomal subunit protein mS22	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13071 all species →	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17401	MRPS22; small subunit ribosomal protein S22	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.