Gene detail

Detailed information of XP_073249068.1 in Porites lutea

Genomic Location: chr7:4628639...4644986
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073392967.1

ACGTTTTATGTTTTCATCTCATGATCGTCGTTGTTTAAACTTCCAAACGAAACACCAGGATGTGTCCTGCTTCGCTCGGTTTTCTCAACGTAATTGCTATTTTACTATGCGGAGGACAGTTGTGGTCATATTTTAATGGCGTCAAAGCCCAAGAAAAGAGTATATTTGCAGTTAATTGCCCCAAAGGAAGTTTTATTTCAAGCGTTGGCTGTACGCCATGCCCAGAGAACGAGTATTCAGACTCTGTAAATAGCACAAAGTGCTGGAAATGTGATGAGTGTAAGGGAAGGCACAACCTTGTAACTCGCGTCTGCAACTCTACTTCGAATACGAAATGTGCGTGCGAGCCGGGCTTCTACTGGGATGACGCCCTTTTCTGTTTAAAATGTGATCGCTGCAAGAGAGGACATGGAATGGTCAAAAACTGCACATCTGACAGTAATACCGTCTGTGAACATTGTGAACACGGTAAGACTTACTCTGACAAGAAGGACTTTAACTCGTGCAGGAATTGCTCGATTTGTCCAGATGGCTATTTTGAACAGAGAAGATGTTCTAGAAAAAACGACACCATTTGTCTGAAGGACACAGAGCAGAATAAATCTAAGAATAATTGGAAAATCGACAACCGTGGAAGGTCGTCTGGGTCGAGGCAAAGAGGAGGATCGAAACcaagattaaaaaataaaaacagcacACAATCGCCAATACCGCTTTCAACTAATACATCATCAAAAAcgTTTGACGGATCCTCCTCATTAAAATCCACGGAGATGGTAACCACAGGGAGTGAAATGGATCTAGTGATAGCTCTCGGTGTTGTGAGTGGTTTTGCCTTCCTGGTTCTTATAGTAACACTTTCTCTGATGTTCTTCATACGGAGGAAATCTAGAAAGTCCACAAAGGATAATGACAAAGAAAGAGTGGAGGATCCAACGCCGTCTGCTTCGGCTACAGAAGTCGCTCGAGAGAACCCTTACACATCTCTTCCGCACATTGGCACCGGTCAAGAAAAAATGCTCCGCGATGCACCATATACGCTCATCAGCGACCTTGCCAAACTTCTCAACCCTGGGGGTAGATGGAAAGAGCTTGGAGGTCGTCTTGATTTTAACAATACGCAAATAGGCAACTTTGCGCTAGTGCAACAGAATGCCACACAAACAATGCTAGAAGAATGGGGCCACAGAGATTGTGGGACAGTCGTAGCCCTCCAAAAACTATTTCGTTCAATGAAATGgacaaaagaagaaagaatatgTGCAGAGTACGTGTAGCGCTGCTTTCCGTCCGCTAATTTCTTACGTCATTCTCAAGAGTAGTGAGAAAGCATTTTTGTCGTCGTTGTCTATTCCTCGTGTACGTGGCCTTCTACGTGTGTATCTCCTTTTATTTATTGGATACATCACTCAAGAAATGGTAAAAGAGGAAATAATGAGAGCGTTCGTGTAGTGTACTCTCTTCTTCAATTTGTTAGTTGTgcgttttttaatgttttcaggAATTTTTGCAGTCACgatttttcatttctctttgTCCAAAAGGATCAAACAGTACTCTGGATTATAGAATTGTGATCTCTAAACCACTGACAGTGTTTAAAACAGTGAAAAGCTTTACTTAGAGTGCATTTTGGCTGATAACATGCATGCGTACATTGTTTATGGATTCCCCATTCTCGAAGACTTTATAAGGGCAGTTAATCTGAAAGGAATATTTACGGGTCAAATCATGGCAGAAAAAGGTTACAAGAAAAACGAGAGAGCCCCTGGAAAGTTACTCCCCATCGAGTCAGTTCCAAAAGCTTTTGAATTCTCCAGTTCTTTTTGGCCAGAAGATGTTTTCAACTCAATCAGAAGTGACGGTTCGTTCTTGTCGTTAACTTTGCCTTTAGCGATCAAGCCCGTAAATATCCCGCCCCCGTGTCTCCGAGAATGTGGATTCTCAGTTCAAAGTAGCTTAGTCCTTATTTGGAActgtttgttttcccttttgggtattttttaaaaatggaagATCGTGGCTTGGTCTCAATCAATACGCTTCTAGCGATAACTTATGTACAGTGCGTCTTAAATTCTCGTGTAtaatttcttaatttattaTTGCTTCGCGCTTGTCAGTGgttttaaatgaaactgaagaGACTTTGGAGTTCTTTGTTATTGAAAATAGCTCTCAgagaatattaatttttctttagagaAAGTGCTTTGGGTATCTACGCATTTGGCTaagaaacaaatgaaataacTGGTATTAAAATACCGTTTAGTAGTCACGTAGGTGACAAAACAATGATAATTTATACTGCAACCGCTTGAAACAGAATATGCCTCTTCAGAAGCTACAGGGACATTTGAACAATGGGATTCCAGGGATCAAGTTAGTAACTGAAGATAGTTTTAATTGGCCAAAGGTAACGATTAGCGAATCGCAGTTTTCACCCGATTCTGATCGCAAAGGCCTGGTCTTTAGTCTCCCTTAAACTTCCCCAAATTTCACTCCGCATTTCAAAAACGAATAGTGACAGCTGAAATGTAGCACCACAGGAGTTGGATCACAGAGCTATCCAAAAAACTTAATATTGAAGTCAGATGAAATGTGGCCATAAGTGACTGAGTTATACTATTGTAAGGGCAAGATCAAGAAATGAGAGCACTTTCtagaaaaaataacataatgGGAACTGTCCGTCGCTTCGAACTCATTACTCATCTTGTATtatgattttctttaaaaagcatTCATAGCCTGATGAACGATTCTTTCTTTGCAAATAGATACTTATAGCTTGGACAGTTGTTTTTCTCAATAAATAATGCATAGTTAGTCTTTGCAAAATCTATATTTTGGAAACGTTTGCGCAAATAATACATATTTTCTTATACCGAATTATTTTGCCTTAGTCACGGCCACGTTTGAGGATAAATTGGTACCGTTAATAGTTGTTGTGAAGTTTTGGATTCATGAATATATTTTAATGTTGAAGATTGAATTTTGAGGAACTTTCTGAAAGCCAAAAAGGATTCGTTATTTTATGCGATATAAATTGATAATTATACAATGTTTAAGAGGagaatatttttgaaagaaagtGAGAGGGTTTCAGATAATCATATAATATTGAAAGAATAATATTGTGTACAACATAAATCCTGCCAATGGGATGATTTTATACACAGGCAAATGTTAGGCTAAAGATATTTTGTAAAGAactgtaaaaattgaaaaacattcTTACACATAGTTTGTGCGATTAGGACTTATCTAGTGTTAATTAAGTTACTACAGTTGAAAAGCACATTATTCAAAATGGTTTTACCTCGGTGAAAGGTAAACGTTACTCTCGGTATTGCTCGCTTTGTTGTTCTATTTCTGTCCTGTTCTTGATCAACTTTGTTTAGAGCATCATTAGCAGTTGTAACACCAAAGTGAAGCCAAAAAATTTTCTACCGTTCTTAGAATTTACTTTTTCCTAAGTAATTAGCCTCTTGTTAATGGTTCTCTGTGGTTGGGCTTTTCCCATCAACCTCATGTCTCCATGGAATTGCCAAAAAAAGTTATGGTATGTCATCCGAGTTTTCctttgtggtttaattttaccaatggttcaaatttcatttgtttttttactaaCGTTAGGTATGGTAGTGTATTATAATTAGTTTCAAATAGAGGAGagtaaaatttgaaccaaaaataaaaaatttaccCACAACATAAGCAAGGTTAGGAATACATGACCACAACTAATTTTCTTCCTCTCCAGCAGCACTGTCAGTGTGCCTTTTGTGTTAGATCCTAAAGTGTGATCATTCTTAGCTACACTTCCATGTACAGGTGAAAAGTAGTCCTAATTTCAGACAGAAACACAATTGTCtctgtctttattttattttttactttttttttctcactcaAGGAGATGTGGGGTTGATGAACATTTTGTTTCTTAAGGTTTTCTATCACCTGCCACAAATAAAAcgctttttaaaaaggaaaggtTTTATTGACTTGGGAGGATTAAAAATCTTATTTAAAATACCTAATTTATTCACCAGGCAGTCATTTTTGCTTGGACATTTAATGCAAAAGTAtttaaaatccaaaaatatttttgccataTACAATGACAATGTTATTATGCTGTTGTAACTATTAGCATTAAAAAGATGTTCAGATAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00020 all species →	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488 all species →	Domain	Death domain	Interproscan
IPR001368 all species →	Domain	TNFR/NGFR cysteine-rich region	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR052459 all species →	Family	Tumor necrosis factor receptor superfamily decoy receptor	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23097 all species →	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073249068.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.