Gene detail

Detailed information of XP_073250831.1 in Porites lutea

Genomic Location: chr8:4750384...4758825
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073394730.1

CcactctttttctctcttttaaccAGGGTGATGTGACATACAGCAGTTTTATGGCATAACAATCAGAGAGGCCTAGCGATGGGAAACTCAGTAGATTGCTGTTATACCACCCGACAATACAATCAGTGTTACTTCCCATGCATTCGGACTTGTTCGTACACCAGTCGCCGAGTGTGGTACAATTACGATGGACTGGAGAGTGTTCAGCCCTTGATTGACGTCTTCAAACCCGAAGGGAGAGTGATTCACAAGTTTCCTACAACGCTGGTGGACATAACTGAGGATCATGAAATAGCTAAGGCGTTGGCGTCAGGCCTGGATCCACCGGGACAACTAGCTGCCATCTGTCGCTTCGCCAGTAACTATGGATACCGAATTCGCGCCGTAGGAACCGGATCCTCGTGGTCTCGTCTGACCAGCACACGCGACATTCTGATTGACATGACGAATCTGAATCGTATTTTAACTCGTAAGCCAGCGAACCGACGAGAAAATCTACAGAAGGAATACGTGGATATCGAAGTAGAAGGAGGCATGCAGGTTTATCGATTTGTTGAGAAGCTCGACAAGGCCTATGGGCTTGGGCTCCCGATGATGGGAAATTATGCGGGGCAGACAGTTGCCGGGGTGGCTTCTACGTCTACGCATGGATCCGGGTATTTTTCTGGGACTATGTCGACCTTAGTCGTTGGTTTCCATTTAATCATCTCAAACGGCATTCAAGTTAAACTGACCAGAGGAGACGAAACATTTGACCAATGCCAAGAAAAAATCAAGCGTGCGCAGTACGGCGGTAGCCCAGTAGAGCTCAAAAGCACCGATGTGTTTCGCGCAGTGGCTGTTGGATTGGGCTCCCTGGGCATCATCTACTCCATCACCTACCGTTGTATCCCTGTTTATAATATTGAAGAGGAAAGAACTGTTGTCCAAATCCCCTGGCCAGGTCAGAAGGCGTTTCATGTCCAGCATAAATTTGAGGCAATCCTGCGGAACCGCACAGAAGGGGAGTTTTTCTCAGTGTTTGTTAACCCGTATCCTGAGCCGAAGAGataTTTGTACGCAGCATAcctaaaaggaaagaaaaccaCCCGCAGCCCAACATGCTGTGCCTGTTGCTCTTGGTGGTGTTGTAAGGGTGGCAGAGGATGCGCAGAAGTTGGCTGTATGCAGACAGACTGTACAGCGTCTTGCCTTCAGACGTGTGCTTCATGTTGCCCAACACGAATTCCAGATATCACGAACTTTGGCGTTTCTcaattttctcaaaaacatCCTTACGTACAGAAATGGTACAATGTTTTGCAGTTCACCAAAGGCAACATGCACATTCGTACGGCTGAATTTTGCATTCCATTGGCACATTTAGACCAAGCTTTGGGTGAAGTCATTGAAATAGCCAATCAATATGcaaagaagttcaaacagtatTCTTTGTTACCAATTTACGTTCGATTTGTGAAGACAGACGACCTGTACCTTAGTCCGGCGAACAGCAAATGTGCAGTGGATGGAAATAACAATGACCATGCCTGCTATATAGAGATCCCCTTTCTACCAGGAGCATTCGGTATCGAAGAATATCACAAAAACATCGAGGACAAACTGTTCACAAAGTATAAGGCTCGACCACACTGGGGCAAAAATCATCACCTTACGACAGGCAGAATTTATGAGTTGTACCCAGATCTTGAAGACTGGAAAAAGGTTTTTAGACTTTTCAACGCGACGGGTATTTTCTGTAATGAATTCACACACAATGTAGGGTTTGACACATGCATTGCGGACCTATTGAAACTTAGGGCCGGAAATGACACTGGGATTGTTAATGATGGGCTTGCGGAGGACGACGTCATTACGCTGCAGCCCACTGCTTAGAACGTTTTACACATACATACTCATTGTTAAAGTTAATTGCAGTGGAACCatcattcaggggacaccctcgggaccaaCGCAGATGTCCCCTAAATAGGTCTCCCCTGAATGGACGTTGGGCTGGGGATTGTTAATAGTTAAACAACGAgtatataatatttttcttataCTCTACCTGTGACTGCAGATATTGCTTCAAGCAGGTagataatgtataaaaaaatcatgattaactTATCTCTGCG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04030 all species →	ALO	D-arabinono-1,4-lactone oxidase	Family	Interproscan
PF01565 all species →	FAD_binding_4	FAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007173 all species →	Domain	D-arabinono-1,4-lactone oxidase, C-terminal domain	Interproscan
IPR016167 all species →	Homologous_superfamily	FAD-binding, type PCMH, subdomain 1	Interproscan
IPR010031 all species →	Family	L-gulonolactone/D-arabinono-1,4-lactone oxidase-like	Interproscan
IPR016166 all species →	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR006094 all species →	Domain	FAD linked oxidase, N-terminal	Interproscan
IPR016169 all species →	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR036318 all species →	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43762 all species →	L-GULONOLACTONE OXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003885 all species →	Molecular Function	D-arabinono-1,4-lactone oxidase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0016899 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00103	GULO; L-gulonolactone oxidase	EC:1.1.3.8	Ascorbate and aldarate metabolism	ko00053	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.