Gene detail

Detailed information of XP_073251017.1 in Porites lutea

Genomic Location: chr8:26976688...26995863
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073394916.1

GGGTCGCTCTGCATCAGAACGAGGTAATAAACATGGCTGCCGAATGCAGGAAGACGGAAGCCGATAACGTTTCATAGAAAAAATGGGCTTTTCCCCCGTTGATTTCAAGAAAACTCTGCTGCAACTACCGtagatgagaaaaaaatcttgTCTAAGATGTCTGTACCACCTCGCTGGCTTAATTGTCCCAGAAAAAGCAAGATAATCGCCGacaaatttcttgccttcaaaacaCCACTGGGACCTCGTTATGATGCCAACATTCCTGAGGCAAATCGATTTCAGCTGCCAATGTTGTTCGCATACCTTGATTCATTAAAGgtAAAGTTAGGATTGATTATTGACTTGACAAATACGACACGCTTCTACGATAAAACAGAGGTGGAAAGGGCAGGAATCAATCATGTCAAGATGAATTGCAAGGGACATGGAGAAACTCCAACAAGAGATCAGGTGGCTCTTTTCATCAGCATGTGTGATAGATATTTCAACCAAAATCCAGGAGGACTTATAGGTGTCCACTGCACTCATGGATTCAACAGGACTGGTTTCCTTATCATAGCTTATCTTGTGGAGAAAGATGACTGGAGtgTTGATGCAGCAGTTCAGTGCTTTGCACAGTGCCGTCCATCAGGTATTTACAAAGCTGATTACCTGAAAGAGCTTGTCAGTCGCTATGGTGACCCAGCAGAGACCATCGCACCTCCTGAACTGCCTGATTGGTGCATAGAGGAAGAAGAAGGCAGTGATAATGAAGAACAGAATGGAGAGATGACAGAGGATGGCAGCCGCCCAGATGGGAGTAGGAAACGAATACGAAGAGATCCCAGGTTAAAGGAAGCAAAGTTTATGGATGAGATAGATGGAATAGGGGTTGTAAAGTCACCTAGAAGAGAAGAAATCCAGGAACTCTGCCAGAAGATGTGCGGCTGGGAAGGTGGTGGGTTCCCTGGAAGCCAGCCTGTGTCAATGGATGTACAGAACATTAAACTACTCCATGAGAAACCTTACAGAGTTAGTTGGAAAGCAGATGGAGTGAGataCATGATGcttattttaaaagagaaagaaatataCCTTATCGACAGAGACAACAACGTTTTTGCTGCACCACAGTTTCATTTCCCACAGCGCAAATTCCCAAGAGAACACGTCTTTGACACTTTGCTAGATGGGGAAATGGTTCttgacaaagaaaatgaaaagatccACCCCCGTTACCTTGCTTATGACATCATCCAATTTCAAGGCCAAGAGGTTGGCAAGCAGAATCATGATATACGAATGGTGTGTATTGAAAAAGAGATCGAGATGGCTCGAAGTATAGGGgCACAGCAAGGACTCTTTGACAAGTCAAAGGAGCCTTTTAGCATAAGAGCgaaaaagttttttcatgtgGAGAAGGCCGAATGGattttAGACGCCTGGAGCCCAAAACTCAGCCACGAAAACGATGGCCTAATATTTAATCCAGCGGAAGAGCCATATGGTCCTGGGCAGAGTCAGGAAGTGTTGAAATGGAAACCACATACGCTTAACTCCGTGGACTTTATATTGAACATAGGAAAAATCAAGCAGGAAGGTTGTATCCCCGAATTGGTTGGCACACTCATGGTTGGTGGATATGACAGACCTTTTGCTTCCATCAAGGTAACAAAGGAACTGAAGagcttaaacaaaaaaattgttgaatgtACCTGGGATGCTACTTCGAAACAGTGGAAATTCCTCAGAGTGAGAGAAGACAAAAGCTTTCCTAACGGCTACAACACAGCGATGAGTGTTTGTAAAAGTATTCAGCAGCCCGTGACAAGAGAGTGGCTCCTACAAGTCATTGAAAAGTACCGCTATCAGCCAAACCGCCACAGGGACCCTAGAGCATCGTCCTCGAGCAACACTGTGTAAATAAACTTATTAAAGAACAGTGGGGATTTCGTACTCTTTTAGgtgttttggaaaatatttaGCAGCCCGTGTCAAGAGAAAGGCTCCTAGATCACATTGAATAATATCAGTCAAAGGGTAACAGGGACCCCAGAGCAGCGTCTTCGAGTAACACCTTGTACATAAAGAATATTTAACAACAGCAAGCTCAGTAGCCCGAAAGCAAGTTACACACTGTATTTGCAAAATGTATTGGAAACTTATGCTAGAAGATAAGACCTTATCTGGGTAACCAGCAATTTTACGTAGGTGAAGGTTGGAGAAGTCTGACTGACGGGTTTCTCGCCTTCCTGGGACGCAACGATTTGTTTTTCTCAGCTGATAAGGAGGGAAACGACTAGTTACCGATAATTTATCTTCTTTGGAATGGAACGAAGTTAGACTAGTCCGTTCTCGAAGTTCATCTGACGATTTCTTCTAGCAAAACTGAATACAGCCCACTGGATACCAAAAACGATGATGGCCCCAGTGAAGGTCAGGTCAGAACTGCACCGTTACATGGTGGCATTGTAAGAAGCCAAAGATTATGGTGCTTCACATTTTCAAACATTTAGAGGATGCATCCCGGTGGTTCAGCGAAAGATACGTTATCTTATGTAAAAACCGGTGTCAAACGAAGGGGTCGCGAAATCGTGCAGTTTTCCGAGATTCTGGAAAGGAGGTCTTTAGATTCCGACTAGTTTTGCTAAAATGTACTAGGTTTATAATCAGATTTACTGTACATATTTAATAATCGTTTATTAAATATTGAAAGCAGCGCAACTCTAAAAGCTGGCTGCGTAacctttttatttcaaacttgtGGACTTCTTCAGAAAAATTTGTACCGCAATTTACCCGCGTTTAGCagtcatcaacatcatcatcatcatcgtcatcatcc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782 all species →	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan
PF01331 all species →	mRNA_cap_enzyme	mRNA capping enzyme, catalytic domain	Domain	Interproscan
PF03919 all species →	mRNA_cap_C	mRNA capping enzyme, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017074 all species →	Family	mRNA capping enzyme, bifunctional	Interproscan
IPR020422 all species →	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR000340 all species →	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR001339 all species →	Domain	mRNA capping enzyme, adenylation domain	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR051029 all species →	Family	mRNA Capping Enzyme and RNA Phosphatase	Interproscan
IPR013846 all species →	Domain	mRNA capping enzyme, C-terminal	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10367 all species →	MRNA-CAPPING ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004484 all species →	Molecular Function	mRNA guanylyltransferase activity	Interproscan
GO:0006370 all species →	Biological Process	7-methylguanosine mRNA capping	Interproscan
GO:0140818 all species →	Molecular Function	mRNA 5'-triphosphate monophosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13917	RNGTT; mRNA-capping enzyme	EC:2.7.7.50 EC:3.6.1.74	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.