Gene detail

Detailed information of XP_073251434.1 in Porites lutea

Genomic Location: chr8:6495966...6503899
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073395333.1

TCTGCTCTGTGAGACAGCAGAACGACACCGAACGTTTTGATGGCGGCGAAAGCATGTGGTGTTGTAGTGCATGGATTTCCAAGTTAAAAAGTGCTAATTTCCGAACAAAGCAACGTTTCCTAGGATAAAAACTACGTTAGCTCATTCCTCTAAAGCAACTGATGGAAAATTTTTGCGGACTTTGCAAGGCTAAAGGCTTGAAAAAGCAGCTGATTTTGTTCCAGTTGAATTTAGAGGAAGCCATCTTGCTTTGTGAAAACAAGGAGtGTGTCTACCCCCTTGGTGTGTCAAGCAATGCCACCTTAATCGTAAAACGCCAAGCTTCTGAGGTTGTAAACTTTAAGCGAAAACGGAAAAAGAACTACAAACAAGGGAAAAATGAGGAAACAGAAACTTCTGCTTTgaaattcagatgtctggacaGTTATCTTCACTGGAAAAACATCAATTCTCTTTGCTGGCTACACTCTCTTCTGTCTTTAATTGTACACAATGTGACACTGTCCACTCTCGCTCACAATGTAGACTCATTGTTAAGAACACTAACTGACTCGTTCAACAAAGCACAGGAACTTTCTTCAGTTAACAGAGAGCAGGCAGAGAAAGGCTTGGAAGGTGCCAGGGAGAAAGTGTGGAAGTATTTACAGCCCAAAATGAAGTGTGAGCGTGGAGTGAATGACAGTCCTGTTACCGCATTGCCTCTTTTGTTGCGGGAAAATTGTACATTGTTGGAGAAAACTCTGCAGAATTATCAGTGGAAATTTAGTTGCTGTGTTTGTGGTTATCGTCAAGTTGACAAAAGGAGAAAACACTTGGTAACTTTCCCGAATGTAGCAGATGGCTTTGACCTTGAGGATCCAACATTTTTACGTCCTTGCTTCAAATGTGGTGCCCCCAAGCAGAGAAGCATGCTTGTGTATGACAGGATGCCCGATTGTATTTTCTTACATTTCGAACAAGGATTTCAACATCCAGGATTTGAGGACCTGGAATTGAATGCAGAAGATGGTCACTATGTGATGACGCAGTTTATTCAGTACAAGAAGAATCCTGATCACTTTGTTTGCTGGACAAAAGAACCTCAAGGAAAAAGATGGATGGAAGTGGATGACTTGAAGTCACCAGTCTGTAGATGGAGTTCTGCACTTCCTGTTATCTCTCCATCTGAAGTACACATTGCAGTATGGGAGAGGCAAAATGCATTTGTTCAATCCCCTCAGTACTCTGCAACTAGGACAATAACGGCAAAAAACATTCCAAATGAGCCTGCTAATGaggtaaaacaaaattttccggCATCAAGGACTGTATTAATGCCCTCATTAAGAACTGACAGTAACATGAACGTAATGTCCCACGGCAATGATGAGCGAGGACTTTTTTCACTGTCTCACCGGAGTGCACTGTCACGACTGCCTCCATTATTGTTAAGAAGTCGACCGCTGTTCCATGAGTCAACCCACAAACTGGCCGTCGGGAAGTTTGAACCTTACATTCCAAGAAAGAAGAGGCTAGTCAGCTATAGTTGTCCAAATTCTCCTCTTTGTGCAAAGTCAGATGCGGAAACGAGTACAACACCTCTCTCTAGTCCAGTGTTACCAGCACCCTTCTTAACATGGCAGGAcattaaagaacaaaataagaAATTCAAAAGTGATGATTTGCAAAGTGACAGCGGTTATTCGAGTCCAGCTTCCGTTAGCTCATGCAGTAGTCTTCCCTCTTGCACATCCAGCAATGGTGATGCCGCTGTGGATTGTTCAGAAGCTCTTAATGTGCATTCTGAAGAAAAGCAAGGCTTTGGACATTTTGTTGATGCAAGATCATCCTCAAAGGATACTTTGTCTAATTGTCATTCAAACACAGACTTGTTACAGGGAGTTTCAAATTGCACCATCAGTGATTCAGACTCTTGTCGTTCTGCTGATTTGGCAAACAAACTTGAGGAGTTGTTACCTGACTGCCTGCTTGAGAATCCAGAGAGTTCTCTACAAAGCAGAGCAATAAAGGATGATCAGAAATTAAAACTTGCAGACTTTGAGAAATTGTCTGAGGAGCAGGATAAATTTATTCGTGATTTATTGGCAGCTTGAatgcaaaatgataaaagttATGCACACACTGTACCATTGTACGTATTATTCTCTTTTGTAGACAATGTAATAGTATTTTTCCTACAATAAATTTTTCATTGCCTCtttctcattaatttttgtaataaaGAATTTCAATGGCCGTTGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15499 all species →	Peptidase_C98	Ubiquitin-specific peptidase-like, SUMO isopeptidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028890 all species →	Domain	Ubiquitin-specific peptidase-like, SUMO isopeptidase	Interproscan
IPR028889 all species →	Domain	Ubiquitin specific protease domain	Interproscan
IPR033505 all species →	Family	USPL1 peptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15294 all species →	RETINOVIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032183 all species →	Molecular Function	SUMO binding	Interproscan
GO:0015030 all species →	Cellular Component	Cajal body	Interproscan
GO:0016926 all species →	Biological Process	protein desumoylation	Interproscan
GO:0030576 all species →	Biological Process	Cajal body organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073251434.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.