Gene detail

Detailed information of XP_073252522.1 in Porites lutea

Genomic Location: chr9:1761093...1769827
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073396421.1

ATGTATCGATCAAGAGTGAATATATTTTCGTACAAGCTTGTGTCTGTGTGTATGAGTAGGCAGTTTTTGGTAGAGATTGGACATGTAAAGCACGATAACTAAGTTGTCTTACAGTTTTTTCCTGTAAGAAAGTATTAAAAGTCTCTTTGCTTTGGTTATTCGCTGAGTTTAAAGGCTACCTTGGTTTCGAAGTTCAACTTCATACTGGTTCACCCAGTATGGGTGACAGTGGTGTTACAGCACGACACAAAACCATACCGGATGACAAGatatGTCTGCGATTAATTCTGGTCTCTGGCAAGACACATGAATTTATATTTTCACCTAGTGACACAGTATattatataacacaacatgtTTATGAAAACTGGCCTGAAGATTGGAAAGATGAAGCAGTTAGTTCCCATAACATACTAAAACTTATCTACCATGGTCGGTTTCTACATGGCAATGTTTCTTTAGCAGCTCTCCATTTAGAGACTGGCAAGCGAAGTGTAATGCACCTTGTAGCAAGAGAAAACTTACCGGAACCCGCCACTCAAGGTCAAAGAAATCGAGAGAAAATTAATGAACAAAGTTGCTGTTGTAGTATTGTTTGACGTGAGGGTCAAAAGTCCATGAAGATGCATAGAAGAGACTAATGCCaaacatgtttttaaatttaaacatattaaatttaattgttaaaataatttaacaacCCTTTATGCGCATGTGtacaataatttctctttaTATAGACCGTAAAGTAGAGAGTTCTCATTGCCTCTTAAGAGGTAAGGATTGGACCTCTCTCCGAACTGCCAAGTGTGCACGAAACAAGTCCAGATGTTAGAGGTCAAACTTCAGAGTTTTTAAACCATTTGAACGCGTAGTTATTTGATTATTTGTCACTCTAACTTCTgaatctgtggacgaaatcctatggtgttaccattcaaatgtaATCTCTTTGGCAGAAAGTCTGCAAAGTGCAATTTTTTTCATAGtatttagaaataatttgaaatttttttgtgaaatttccTTTAACACCGTTAGGTTTAAGAGTGAAAGGGATAAATGAAGGAACATACTCACCATAGTGGTTAAAAATAGTGTACTTGTAAAAGTGTAGACGTTTTCATTGAAAtgtcaaaatttgcatttcaattattatttctgGAGTTGTATGGCAATACATGCTACAATGTGTTCCTTATATTTCAAATTGTGCAAGTGCTCTCTCTCAAGAGACATCATTGAAACAGTATAACAACATGTTGTTGCTGGAATATCTCCGTTTCTCCTTTAAAAtttattaagaattttttcAGGAGTGGGCATTAGTAGGGTATCTAAATCCAATCTTTCagaagaaaagtgaaaaataatgaAGGGGGCAAGGGGTGGGATCTCAAACAAGAAAAACCTCCATGGAGAGGGCATTGACAATTGTAGGATCTGAATGTGCTAATTTGTTACTTAACCTTTTGAAATAATCAGCATTAATTAAAAGTGGTCCTGTTTACTTCCAGAATGTTATGATTGTAGgcaaaaaagttgtttttacaTAGGGAGGTTTGAGTATTTGACTAGTATCATTTCCTGTTGCCCTAGGACATATAATGAGAACGCATAAAGGCAAGTGTGGACAAAAAATTACACATCATTTATCCTTCGTAGTATCATCCATTACCCTTATTACCTTCCCAAaatttttaccactttttttaaaaaaatagcaaattaGTAGGGATTGCACATGAGTCTGGTGTATTGCAATAATTCAAGTTGTATAGTAATCCTTTTGTGAATGAAGAGCTCGTTGCATAATAAAAGGGAAATCAAAGTATTAAGTCACGTAGCCTGAACTACAATTATAGCTTTCATTGATGACTAAATGCTTTCAAAGTTCTCAAATTTTTAGCAAATtctgagttgtttttttttaagagttAGGTCATATTCTAACTTTCCATGTAAATTTTCACTAATAATATCACAAATCCTTAGAGATATTTTAAACTTCTTGAGTCATAGATTATAATCTGGCCCTGGTTATTCAAACATTGgatggataaatcactatccactggatattagggaaaccaactgcattatccactggatagagtggatagcgttatctacCTTTTGAATAACTGGGGCCAAAACTGTAAAGTGAAATGTTTTCAAGAGTCAAGGCTGTAATAATTATCTCCTCCATCATAAACAGATTTCCTCTGGTGGCTGTATGCTTGTTTGGAATTGAAAAGCTGGCTTTATATATGCTGCCATGATCCTGAGAGTGACTTTTCTAAAAATTTGTGCAGAATCATTCCTCTCTGGCTTTGGCTCAACCAAAAGAAGGGTTAAAAATAATCTTACACAACTAAAACTCTTGGCTAGAGATAGACTGATAGATAAACGACATTCAAAACTTTACATATATTTACATATTATTTGGAAGAGTCAATGTTATGTTAGTGTCCAGTGCAGCCGATATTGAGCGAGTTGCCCAATCTAAggaggagtgttgcgtgacTGACTAAATAACCATTGTATTGGAGACTCCTGTCACAAGTTGATGGTGGCATATAGAAGCCAGTCTTCTTAAGACCTCAGAAAGTATTCTTATGTATACTCAAAGTTCACGCATTTGGTTAGACATGAACATGGAATATTGAATGATGACTATCACCTTAACCTCTGTACCATCTCAGACATTTACTAAATTGTGTACCATTAAGTGGAaattcaaccccccccccccccccccccggatacTGCGTCAACATACTGGACTTTTCCTCCAATTGgtgacaataataatttattgtgtttttcattgtttgttgGTTTCTTAGAGCTCAAATATCATTAGTAAGTTTAATTTAAAGGAGTAAAGTGCTCGTAGCACTACCTGTCAAAAGGACCTTGTAATAGTGCAAGCACTTCACCATTTGAGTGGTAAAAtagaatttttaaaactttttgttaATTCTTCAGTTACCCAAATGCCTCTCTAAATGTGCATGTGGTCAGAGGATTACTTTGAATATCAATGACGTTTTATTTTTGTGAGAACTGCTGTAGCATAGaaacataaaatattttttaaataggcATGTCTTGTTCATAACTGTAAAGAAGACAATACACAGTATATTACTTCTTGTTGGTAGCTAGGCTTCTTATTCATATTGCTTTGCTCTTTGTGTTATTTTCTCCAATAAAATATGgttattcaagaaaatattcataCCCATCTCAAAGATTACTGACTTGCCAGCAGCCTGCATGGTATTCATTTCCATTCCATTCAAAGAGATGCACAAGGGCATGGGGTAAAAAGTTGCTCCTTTTTAGTTCCTCACACTTATTTCACACCTCTGGatcgagttgttcaaagctgggttaagataacccagggttagtgcgagatttgaattcagatatgaaagcttaaaaatcatttcagttttaattctttttgtctacaagttgattaTCAAAggctttaaaaataacagagaaaattatccaagaaaatgcttttaagcgctaatcagccttcgaacaactgagcCCAGATCTCCTGCTTGGCTTAAAGGAAACTAGGAACAACTGCTGCGCAGTTTACTATGGAAGGGGTATGGATATCTTTTTGTGATGCATTAGCACTGCCCAGTTAGATTTGTTTGCAACAATTTCAAAGTAATATTATgaagttttttttacttgtcAGTAACATGTAAAGAGTAAATTAAATAATAGATTTGTGTGGAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13881 all species →	Rad60-SLD_2	Ubiquitin-2 like Rad60 SUMO-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039540 all species →	Domain	UBL3-like, ubiquitin domain	Interproscan
IPR047977 all species →	Domain	UBL3-like, ubiquitin-like domain, metazoan	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR040015 all species →	Family	UBL3-like	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13169 all species →	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073252522.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.