Gene detail

Detailed information of XP_073252805.1 in Porites lutea

Genomic Location: chr9:938840...945812
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073396704.1

AGCAGAGCAAGCCAGGAAGTGAGGCGCTCACCGGTTTTTTTGCTGCATCGCATCGACTAGTCCTTGCAGCTTTATagtgtttttcttgtttctccTTTGGTCCATTTCTCCCAACACTTGACAGCCTTTAGTGATATTTTAAAGTCATGCCTCCACAAGAAAACGAAACTGCAGATACTGCGACGAGCAGTCAAACCGAAAGCGATACGTCACCGCCGGCCAGCCCTAACTGGGCTGCGCTTAGAAGATATCTTTTGGACAACAAGATTGATTCAGCATTATGGCTCACAAGAGTATTTACCATCATAAGTGCAATTCTTTATTTGCTGCCATTCTTTAGCCCCATGTTTAGCTATAACTGCTATAAGAGAGCTCTAATAAGTTCAGCGGCGACGTCAGCGTTAAGGTTGCACCAAAGGCTTCCAAGATTCCAGTTTTCAAGGGAATATTTGGGATTGTTATTTGCTGAAGACAGCTGTCATTACCTTCTCTTCAGTGTTATGTTTATCAGCTCTCATCCAGTTACAATTATCTTAATTCCTGTTGCATTGTTTGCTCTTCTCCATACTGTGTCATTTACTAAAAAGTTACTAGATATTCTTGGAAGTGGTGGTATGCTAAACATGTCACTTGTGAGGTCAGCTCAAACAGCTATTCAGAAAGTACAGACGCATCAGCAAGGACTTCTGAGGTTCATTGCCTGTACAGAGATCATGTTAATGCCTGCTGTTGTTTTAATGATGTTGAGtgGTCAAGTCGGCATTATCATTCCATTTGTTTACTATCGATTTCTTGGACTCAGATATGCGTCCAGACGAAACCCTTACACCAGGCATCTATTTGGTGAACTAAGGCAATCAGTTCAACAGCTTGTAAGTCATCCTCGCTGTCCTGGTTTCTTACATTCGCTGGTGTTCAGAGTCACTGCCTTCATTGCAAATCTGGCTCCTCCAGTGATGACAGCACCACCACCTCAGGCTTCTTCATAATcttgaaaataatataatacatgtattattgaaTAAGCTGTTCCTTAAATATTCATCAACTAAGTTAAGGATGCTTTCAATTATTAGTCAGAAGTGGCTGGTCAGGTCCGCGGCCAGTCACTATTTTTTAGGACTGTCCAGCACCAGATCAGTCTATTTCTAAAAAAGTAGGCAGGTCAGTAATTTCTTTTTGTCTGGCCAGTCAGTCTGACTATTGAAGCTTCCTAACTGATAAAATCATTGAAAAATAAGAAGGCATTATGCACTTGCCTTGATTTTGCAGGTTGTAAATGATGTAGTACAATACTTGGttacatttttttacattttgtgtACACTGTAAATGGCCTGCCGAATGGTTAATATGGAAGTTACTCTCCAAATTATTGTCAATGTTGTGGTTAGTGTTATCCTTAAATCAAATTGTTCTTCCCTTGTTTGAAAGTCATCATTGGTATTATAAGTAACTTTGCCCAAAGAGAAAGGGAAATAATATTCGAgtcaaggataaaattgaaccaccaCGTCCACAAAAATTGTCCAACAGTGTCAGAGTTTTAAGATAGGAACATTGTCATAAACAGCATTTTTAGTTCATAGTGTTGAAATGAATGCTATGTCTTTTGTTCTTGTAAACATTCTGAGTAAactaataaataatttatttatcagTCCAAATCATTAGCAATGTCCTAACCCATGTTAATGCTACCACCCAATGTAAAGCATCTCTACAGTACTGGGTAGGAGAATAATTTTCACCCAGGAAGTTTCAGCCTGCTAAAGGATCTTTGTGGATAAcattttatttggtttttaCCCTTTCTCCAGCTGTGTTTTATTTGAAATGACAAATGTAGTTGTTATTATTTATACATGCTGTATTTGAAAGTTTCATTAAATAGAAAACagatttgaaaacattttccttaTTTTGAGATCTCAAAAACAGGTTGTAtaaatttttttccatattaTGGTATTGAATTCTTTAGCCTGTGTGGCTGGTGGTTTTTTGGGTGAGATTTTCATTTGTAGATCATATTTATACAGCCCCACAaggtcaaacaaaaaaaaaacgatgcctTCTCTCCTTGCCCCTCCCCTGCCCcccattttttttctggttcGACCTCAGTTCAGCTTTCGTGTGGTTTATCTCTTACTTTATgaaccacaaaagaaaaaacaaacaaaaaaaaaaacccaccagctatgcaggctatgAACTCTAAGACAAAAGTAAAACTTAAACttgtaatgagaatttcaaGCTAAATGAAGCTTTAGGCAGACCATAGCTTGCaccattgttttgtttttctttttgctgtaAGAGTACTTATTCTTTAAGTGTTTTgtattaaattcatttttaacctCAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03661 all species →	TMEM33_Pom33	Transmembrane protein 33/Nucleoporin POM33	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051645 all species →	Family	PER33/POM33 transmembrane regulator	Interproscan
IPR005344 all species →	Family	TMEM33/Pom33 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12703 all species →	TRANSMEMBRANE PROTEIN 33	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0061024 all species →	Biological Process	membrane organization	Interproscan
GO:0071786 all species →	Biological Process	endoplasmic reticulum tubular network organization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20724	TMEM33; transmembrane protein 33	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.