Genomic Location: chr9:28633450...28648288
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families
| CDS |
| LOC140949144 |
| Transcript |
| rna-XM_073398375.1 |
| Protein |
| XP_073254476.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13639 all species → | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| PF02225 all species → | PA | PA domain | Family | Interproscan |
| PF13917 all species → | zf-CCHC_3 | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR046450 all species → | Homologous_superfamily | PA domain superfamily | Interproscan |
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR003137 all species → | Domain | PA domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46539 all species → | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15692 | RNF13, RZF; E3 ubiquitin-protein ligase RNF13 | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
