Gene detail

Detailed information of XP_073255802.1 in Porites lutea

Genomic Location: chr10:28915711...28923850
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073399701.1

CAGAGTGTAATATTTCCATCAGACTAGCATGAAATTCTTGTTTTCTACAAGATAACATTTGAAAATCACCGAAAATGATCTACAGAATGATATATCcgttaattttaaattttgtcatGTCTGCTGTGGCATTTTTGATAACTATGAAGTTGATTTCTGGAATGAAGCCCTTGTTCACCAAGGCCGGTCTCTGTGGTAAAGATCTcaacaaaaaagacaacaaagatTTGATCCCTGAGGGTCTTGGTGTTGTTACTGGAGCAGTGTTCCTCATTTCCATGTTTCTGTTTATCCCAATTCCATTTTTTACTATTTGGTTTGAAAAAGGCGACTATGATTTTCCACATCATGAGTTTGTCATGTTTATTGCTGGTCTTCTGTCCATTTGCTGTATGATTTTCCTTGGTTTTGCTGACGATGTTCTTGATCTCAAGTGGAGAGATAAACTTCTGCTTCCAACAATGGCTTCTCTTCCACTACTGATGGTGTACTTTGTCAATATTGGTGTCACCACCATTATAGTACCTAAACCTCTCAGATTTATCTTAGgatttgatttaaatttagGAATATTTTACTACGTGTACATGGGGATGCTAGCAGTGTTCTGCACAAATGCAATCAACATCCTATCAGGTATAAATGGTGTGGAGGCAGGGCAGTCACTAATTATCGCAATCTCTATCTTGGTGTTTAACTTTATTGAGCTTCAAGGAACATGTTGCTGGCAGGCTCACTTGTTCTCTGCTTACTTCATGATGCCATTTATTGCTACATGTTCGGCATTACTTTACTACAACTGGTACCCTTCCCAGGTGTTTGTTGGGGACACTTTCTGCTATTTTGCTGGCATGACATTTGCGGTAGTTGGAATCTTGGGACATTTCAGTAAAACAATGCTTCTCTTCTTTATTCCGCAAGTCATCAACTTTGTCTACTCTTTACCACAGCTGTTTCGTTTTATCCCATGCCCAAGACATCGGCTGCCAAAGCTTAATCCAGAGACTGGCAAACTTGGCATGAGCCATTCAGTGTTCAAGAAATCTGACATTCGTCCTCTAGGAAAACTCATCTTATCTGTATTCAGCCTTCTAAGATTAGTACAAGTTGAAGATGGTGTGGGAGAGGATAAAAAGTCCATGCGTGTCAACAACTTTACACTAATAAACTTTGTCATAAAAATGCTTGGCCCATTACATGAAAGAACATTGACTACTATAATGTTAGGAATACAGATCCTTGGAAGTGCTGTAGCATTTATCATCCGTTATCACCTAGTAAGATTTTTCTATGATGTGGAGCCACATTAAAAATCagaatttcttttttacaaaattgaatAATTATTTCAGTGTTATATTCCTCGTTTGGATGTTTCCATGGTGATACAAGACAGAGGCTGAAATGACAGTCCAAAATAAGAAAATTCAGGACAAGAAATGTCAATTTTAACTATGATAGTCTGTCCTGTGAGACCACACAGTCACTGAGGTTCCAAATGAATGGTCAAGAgatagttgttgttgtttcttttttttttacattcagatgcaacagtttttgttttaaaaaaactacagaGCTAACATTACAGCTCGGTTTTAAAAgcatataataatattactcAGGTCGCTGAGTTAGCAAGTTCATGTTTTGTGTATTTCCAACCCAAAAAGAAACCACACAGAGGTAATAAGCCGGTTTCAAATTCAAAATTActgctgaatacaaacattaacaaCACATTCAAACGGGGTTAGTGTCAATTAGTCACAAATTCCAGCAAGTGTTTGAAATTGAAAATACACAATAGAAGTTGATTAATAACTATGTCTTCTTCTCACTGGAATTTATGAATATATTTACTTCAAATGGGggctaagcctgtaaaaaatgTGTCCCCACTTCTTTTATTCAGCAGTGAAAGTGATCTTGAAGCTGAACTATTATGTGAAATAAGTGCAATAATGATATTAATTATTTCCTGCTAGCAAAAGTCTCTTTTCCTACCTAATACCAGGGAAAAGCGACCTCTGCAAGCAGAGAATAggcaataaaacaaatataaattattattatacattgtagtcaccatctgtcttctctttggataaaagcctacagttaattctgggaaacagcacaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00953 all species →	Glycos_transf_4	Glycosyl transferase family 4	Family	Interproscan
PF21383 all species →	DPAGT1_ins	DPAGT1 insertion domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000715 all species →	Family	Glycosyl transferase, family 4	Interproscan
IPR033895 all species →	Family	UDP-GlcNAc-dolichyl-phosphate GlcNAc phosphotransferase	Interproscan
IPR048439 all species →	Domain	DPAGT1, insertion domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10571 all species →	UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016780 all species →	Molecular Function	phosphotransferase activity, for other substituted phosphate groups	Interproscan
GO:0003975 all species →	Molecular Function	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0006488 all species →	Biological Process	dolichol-linked oligosaccharide biosynthetic process	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01001	ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	EC:2.7.8.15	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.