Gene detail

Detailed information of XP_073256902.1 in Porites lutea

Genomic Location: chr11:7135134...7161052
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073400801.1

GCGCGGAGATGTTGCGTGGAGCAAAAAAACTCCGATTTCATTCGAGTGTTTGTGCAATATTTATGCGTGACAAATTTGCACGCAAGCACCGTTTACTCAGCAAATTTGTGGTGACATTAACATATCACTTTCCTGTTATGGGGGTGACGGTTTCCTCCAAGAGGGAAAACAGAATCCATAAACACGTCCCCAAGCCATCATTTGCCAGCTTTTCGACATCTGGTACATTGACTACTGATTCATGCAATCGCGAAGATGTCGAAGGGGCAACTTCAGAAAACACAAGCATGATTGAAGTGACTGTGGGCCAGTATGATGACTGCTTGGAAGATGGAACGATGAAGACAATAGACATTGGTGAGTCAGGGAAAGCACTACTGGTGCGAGAGAATGGACAGTACTATGCAATTGGTCATAAGTGCACCCACTATGGAGCTCCGCTTGCCACTGGACACCTCTGCAATGGTCGTGTACGGTGCCCTTGGCATGGAGCTTGCTTTAATGTCAAGACTGGAGATATTGAGGATTTTCCTGGTTTGGATAGTGTACCAAAATTTGAGgTGGTTATCAAGAATGATAATGTCATAGTCAGAGCACATCCAGAGCAATTAAAATCCCATAAGAGAGTCAAGCAGATGGTGAAAGCAGATACAAGCTATGACAAGCGGGTCTTTGTTATCATTGGTGGTGGTGGTTCAGCCATGAAAGGAGCAGAAACGCTCAGAGAGGAAGGCTTTAAAGGCCGTGTTATCATGGTTACAAAGGAATGTCACTTGCCTTATGATCGACCAATTCTAAGTAAGAAATTATCTGCCAGTGCTGATTCAATAAAGCTGCGATCAGATGAATATCTCAAGGAATATGGCATTGAAGTCCTCTATAATGTTGAGGCCACCGCTCTAGATTCTAATAAAAAGACTGTCTCGTTAAGCAATGGGACAGAGTTAAACTATGACAATGTTTTGATTGCCACTGGTGGCAAGCCAAGAAGTTTGAATTGCCCTGGAGTTGATCTAGAGAATGTTATGCTGTTAAGAAGTCCTGAGGATGCAAATAAGATCGTTGAGTTGGTTCCTGGAAAGAATGTAGTCATCATAGGAACATCATTTATTGGTATGGAACTGGCATCAAATTTTGCTGACAAGGCAGCCTCAGTGACTTGTGTTGGTAGAAGCAATATTCCTTTTGCAAATATTTTTGGAGAGAAAATTGGTTCTATGCTGAAAAAGGTGCATGAAAATAAAGGTGTGAAATTCATCACTGATGCAGCTGTAAAGGAATTTAAAGGAGAAAATGGAAAATTGACAGCAGTTTGCTTCAACAATGGCACAGAAATTCCTGCAGATATTTGTATTCAAGGTGTAGGTGTTATCCCTTCTACGGATTTTTTGAAGTCTAGTGGAGTACCATTGTCCAGTCGTGGGGACGTAGTtgttgacaaaTACCTGAAGGCATGCGAGGGTGTGTTTGCTGCTGGAGATATTGCACACTTTCCTCTAAAGATGTTGAACGGGGAGGCAGTTTCTATCGGTCACTGGCAGATCTCTCACAAGCATGGTCTCACAGCTGCGCGTAACATGCTTGGACGAAAAGAAGAGATTAACACTATTCCTTTCTTTTGGACTTCCCAATACGGCAAGAGTATCCGATATTGTGGTCATGCAAAATCTTTTGATGATGTTATCATCGAAGGAGATGTAGATGAACAGAAATTCACAGCTTACTATGTCAAAGGTGACCGTGTTCTAGCTGTAGCTACCATGGGGCCTGGGAACGCCTGTGCTAAAGCAGCTAATCTGATGTTTGAAGGAAAAATGCCTTCTGGTTCTGAGATAAAggcCAGTCTTTGACCCACCGACGCAACATACAGTGACAGAGTAGTCGAAATAGCAAAGGGAAAAACTTTTTTATTGCCGTAACTAGATTCACACTGTAATACTGAAGCAACATAGTAGGACAAGGATAGGATTCTCCTAGATAGATATATCCTCAttactaaaaaattaaattaaatcaaagtCCACCCGAGTCCAGGGCGGGCCATTAATCCTCTTAGGAACACTTACTATTAGAAAAATGAATAGAGACACCCGTATAACTTTCTGGTAATTTTGTCAAGAGAAAGAAGGGGCAGTTTTTTAATTAATCACCCCCTTCTCGAAGAgtacaaaatttatttaaaagaatCCATCCAGCGACTGCCCTTTCATGATGGCAAGCCGGAGCCCCTGTTCGTTACAGCATTTAGAGATTGAGGTCATGTCTGATTCGCCGTCTTAGGTTCCCTGTGTGCGCGTCGTTATCTTTGGGTGCCTGTGTGATCTGTATTCGGCCACAACGGGACCATTCATCTGTTTGGTGTTGGAGCTTGTACAGTAAATACTCGTTATTAATTCCGGCAATGATTCACAAATCATACCATCGGGCTTCCAGGGAAATATTATTTGTGCTCAACTGGTATCTTCTTCTTTTACGCCAAAGATCCCTCAGGATCCGTAGACGCACTCTGATGCTGGATTATTCTTAAGTCTCTCTTCTCAGCAAGCCTGATAGCCTGCGATGGTGTACTCCTTGTCCATTCACAGATGTCTGTTATCCAACATCTCTGTGGTCTGGATTATTTTAAATTAGTTTATTTATGAAACTTATGAAGATATGGTTTACAACCTTTCTTGTTGTATTAAGCGTTTATTTTATTAAGCCTTAATTTATCACATTAGTCTGTTCATATATTTAAAAATCCTACAGCCTTGCTttaccacaggtaacccaaacTCGAAAAGCCTTTcattgacgtcaaaatgtgCTAATCGTGGGGTACCTGTGATGAAGCTTAGACATTCACCCTGTTGTTCAGTTATTTAAATACATGTAGGAAAAACTTGTGACAACCGCAAAAATAAGAAGGAATGCTTACCTGTAGAAGCGTTAGCCAAGCCTTCAATAGCGAatattgtatatttttttaaagtatccCCGCTTTGATAATATAACGGTATTTAGCAtgtttttaccctttttttttttcatttttaacatGTTTTTACACATTGTTATAATCTAGATAGAAAAAATGATTAAATAAATAGCAGTTATAACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF14759 all species →	Reductase_C	Reductase C-terminal	Domain	Interproscan
PF00355 all species →	Rieske	Rieske [2Fe-2S] domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036922 all species →	Homologous_superfamily	Rieske [2Fe-2S] iron-sulphur domain superfamily	Interproscan
IPR028202 all species →	Domain	Reductase, C-terminal	Interproscan
IPR016156 all species →	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR050446 all species →	Family	FAD-dependent Oxidoreductases and Apoptosis Regulators	Interproscan
IPR017941 all species →	Domain	Rieske [2Fe-2S] iron-sulphur domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43557 all species →	APOPTOSIS-INDUCING FACTOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016651 all species →	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22747	AIFM3; apoptosis-inducing factor 3	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.