Gene detail

Detailed information of XP_073258449.1 in Porites lutea

Genomic Location: chr11:16889118...16910205
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140952901

ATGGAGTCTGCTTTACCTCAAGGAAGTATTAAACCAGTTGGTGTCTCTGTTAGTCAGAGCCAGATTACACGCAAAGTTGCATCTAAAAGTGCTCAGGGGCTTGCAAAGAGTGAAGATGCCACAGTTGGAAAGAACCCAAAGAGCGAGGATGGCACAAAAGGAAAAACAGTATTGGCAGCTCCAACTAACAAAGCAAAGCCAATAGCATCAAGTTCTGTGTTTAGGAGAGCAGAGGGGAATAATCCAGCTGGTGTCCTTAATAGCATTGATGCCTCATTTCAAATGAGACTACAAGAATTAGAGGAAAAGCAAGAGTTAGAGGAAGAAGAGCTAGAAGAGTTTGAACTCTTAGAGCAAGCTGCAGCAAATGCTTCCTTTTCGTCCAGCTCATCAGTTGTTGTGAAGGTGTTGGCCAAAGCTCGAGGGAGCAAACAGCTCAGAGGCGCCGAGGGAATTCTGAGTCCTGTTGATACTGGTTATGGTAGCGGTGATGGTAAAGTAACGTCATCAGCTGATCAGTGTAGACTTAAAAACATGGTTCAACAGCAGGACAATGTCAGTGAAGATGAAGATAGCGACATCACATTGCAGGAGATAAGCTTGGACAGTGCTTTGGAGCTTGATAGGAATGGTGAAATCCCCAAAGAGACAACCGGAGATCAGCACGTTAAAGCTCCTTTATATAATGATCCAGGCTCGGCGTCTATTGTAATCGAGGACGACTTCAATGACGAGGTAGCTTGGGGCGAGATAAAGAGGCAGGCGGGAAGCAACGCAGAGCATTTGACGAACGCAAATAGGGATGATTATGATGATGATGATGATGATGAAGATGAGGACAGTGATGTAACAATCAGCGACATTTTCCCTCTGGTAACTTCCACTCCTCCGGCACATTTAAAGGGTGGAAGAGCTCAAATAACAACAGAGCAGGCTGCAGTGAGTGGTGCTGACGGAATCATCGCATCGACACCACCAACTTCTGCCCTTGTTACTAAGTTGTTTCCACAGTTAAAGCCAAAGCAAAAAGCTACTCAGGTCGACGCAAAACAACCAGTTACTGAAGTGGCTCCGCAGACCAAACCTGCAGAAGAAAAGAAAGAAGAAGCTTCAGACGCTGTTCAGAGTATAGCGGTCCGGCAAAAACTGAAGGAACTGGAATCTGAGATTGATAAGTTCAGAACTGAAAATGCAGTTCTGGCTAAGATGAGAACTGAACGAGAAGAGGGTTTGAAAAAACTCCAAACTGAGATCGCCGCATTTGACAAGCAGAAAACAGAAGAACTTGATCGACTGGAGCAGTTCAGAGAGGAGGAACTTCGAAAATTACGGCGGGAGAGACGAGTATTTGAAAAATATCAGAGAGCCGCTCGAACTATGCCAGACAAGAAGGAACGCGAAGAGATCGAGGCGTTGCGAACACAAGTAGCAGAGCTACAAGAAGAACTTAAGCGTCGTGAATCACGCTGGTCAGCGGCGTCAACACGAAGTCGACAGAGAATAGAAGTTTTAGAACAACAGAACAAGGAATTACAAGAGGAAGTAAAACTCTTAGGACACTATCGACTTCAGCAGTGGAGAGAAAATGAACAGGCAAAGGCAAGGGAAGAAGCGGATTCAAGACCGAAGAGGCCTATACAACGAAAACTTGTCAAAACAACAGAGGAAGAGTCCGGACCCAGACTTCCTCTGAGTCATCGATCTCCGCCTTTAAACCCTGCTCTTGTTGAGGCAGTCTCAAGGTCCACTCCAGACAATGCTACCGCTGCTTCAGAAAACAGGTCACCGGCCGCTGGAATAGATTCAAATAATAATCGCGCGATGGGTCTTCCCCGAGACGAAATCACATCATCACAAACACACTTTAGATCAAGAGAAAAAAGCCCGGAAACACCACCTTTTGACACACCTGACAGCAATCATGTTCACGATATTCAGCAGTCGAAACGAAGCAGTCCAAGACGAAGAAGCAAGACGCCTGACAGCGAAAAAGTAAAAAGAAATGTTCATTTTCAAGACGAACAGACAGCTCGACAGAATGGAGAAGAAGAGGATGCTAATTCATGTGAAAGAACAGGAAGGCAAGACCAAAGGGAAATCATGCATTCTGATGGAAAGGTGGAAAAAGTCAACAGCGACGGCTCTCGTCTCATTTCCTTTGCAAACGGTACAAGAAAAGAAATCAGTGCTGACGGCCAGACCGTTATCGTCACTTTCTTTAATGGAGACATCAAGCAAATTATGCCTGATCAGCGAGTGATTTACTATTATTCAGAAGCGCAGACTACTCATACCACATACCCTGATGGACTGGAAGTGCTTCAATTTCCCAGCAAACAAGTTGAGAAGCACTACCGTGATGGAACAAAGGAAATCATCTTTCCTGATCAGACCATTAAGTACCTGTACCCAAATGGAGCGGAAGAATGCGTGTTTAGTGACGGTACCATACAAAAGGTTAACGTGGAAGGAGAGAGAACTATTGAATTCCCAAATGGACAACGGGAAACTCACACCAAGTGCTATAAAAAAAGAGAGTACCCTGATGGGACAGTAAAGACAGTCTATCCGGATGGTCGAACAGAGACCCGATATGCCACGGGACGTGTGCGGGTCAAGGATCGAGATGGTCGGGTTATAGTGGATTCTTTGAACCAACTAAGATGA

Transcript

rna-XM_073402348.1

CATTCCTTAGAAAAGGTCAAGGGCTTGCCAGGTTTAAAGGAAAATCAACATCAAATAAACCAGTAGGTCTACAAAAGCAATCAACAAATCAGCCATCAACAGCCCctcagaaaaaggaaaagaagacaaCTAGGAATATGGAGTCTGCTTTACCTCAAGGAAGTATTAAACCAGTTGGTGTCTCTGTTAGTCAGAGCCAGATTACACGCAAAGTTGCATCTAAAAGTGCTCAGGGGCTTGCAAAGAGTGAAGATGCCACAGTTGGAAAGAACCCAAAGAGCGAGGATGGCACAAAAGGAAAAACAGTATTGGCAGCTCCAACTAACAAAGCAAAGCCAATAGCATCAAGTTCTGTGTTTAGGAGAGCAGAGGGGAATAATCCAGCTGGTGTCCTTAATAGCATTGATGCCTCATTTCAAATGAGACTACAAGAATTAGAGGAAAAGCAAGAGtTAGAGGAAGAAGAGCTAGAAGAGTTTGAACTCTTAGAGCAAGCTGCAGCAAATGCTTCCTTTTCGTCCAGCTCATCAGTTGTTGTGAAGGTGTTGGCCAAAGCTCGAGGGAGCAAACAGCTCAGAGGCGCCGAGGGAATTCTGAGTCCTGTTGATACTGGTTATGGTAGCGGTGATGGTAAAGTAACGTCATCAGCTGATCAGTGTAGACTTAAAAACATGGTTCAACAGCAGGAcaatgTCAGTGAAGATGAAGATAGCGACATCACATTGCAGGAGATAAGCTTGGACAGTGCTTTGGAGCTTGATAGGAATGGTGAAATCCCCAAAGAGACAACCGGAGATCAGCACGTTAAAGcTCCTTTATATAATGATCCAGGCTCGGCGTCTATTGTAATCGAGGACGACTTCAATGACGAGGTAGCTTGGGGCGAGATAAAGAGGCAGGCGGGAAGCAACGCAGAGCATTTGACGAACGCAAATAgggatgattatgatgatgatgatgatgatgaagatgaggaCAGTGATGTAACAATCAGCGACATTTTCCCTCTGGTAACTTCCACTCCTCCGGCACATTTAAAGGGTGGAAGAGCTCAAATAACAACAGAGCAGGCTGCAGTGAGTGGTGCTGACGGAATCATCGCATCGACACCACCAACTTCTGCCCTTGTTACTAAGTTGTTTCCACAGTTAAAGCCAAAGCAAAAAGCTACTCAGGTCGACGCAAAACAACCAGTTACTGAAGTGGCTCCGCAGACCAAACCtgcagaagaaaagaaagaagaagctTCAGACGCTGTTCAGAGTATAGCGGTCCGGCAAAAACTGAAGGAACTGGAATCTGAGATTGATAAGTTCAGAACTGAAAATGCAGTTCTGGCTAAGATGAGAACTGAACGAGAAGAGGGTTTGAAAAAACTCCAAACTGAGATCGCCGCATTTGACAAGCAGAAAACAGAAGAACTTGATCGACTGGAGCAGTTCAGAGAGGAGGAACTTCGAAAATTACGgCGGGAGAGACGAGTATTTGAAAAATATCAGAGAGCCGCTCGAACTATGCCAGACAAGAAGGAACGCGAAGAGATCGAGGCGTTGCGAACACAAGTAGCAGAGCTACAAGAAGAACTTAAGCGTCGTGAATCACGCTGGTCAGCGGCGTCAACACGAAGTCGACAGAGAATAGAAGTTTTAGAACAACAGAACAAGGAATTACAAGAGGAAGTAAAACTCTTAGGACACTATCGACTTCAGCAGTGGAGAGAAAATGAACAGGCAAAGgCAAGGGAAGAAGCGGATTCAAGACCGAAGAGGCCTATACAACGAAAACTTGTCAAAACAACAGAGGAAGAGTCCGGACCCAGACTTCCTCTGAGTCATCGATCTCCGCCTTTAAACCCTGCTCTTGTTGAGGCAGTCTCAAGGTCCACTCCAGACAATGCTACCGCTGCTTCAGAAAACAGGTCACCGGCCGCTGGAATAGATTCAAATAATAATCGCGCGATGGGTCTTCCCCGAGACGAAATCACATCATCACAAACACACTTTAGATCAAGAGAAAAAAGCCCGGAAACACCACCTTTTGACACACCTGACAGCAATCATGTTCACGATATTCAGCAGTCGAAACGAAGCAGTCCAAGACGAAGAAGCAAGACGCCTGACagcgaaaaagtaaaaagaaatgttcaTTTTCAAGACGAACAGACAGCTCGACAGAATGGAGAAGAAGAGGATGCTAATTCATGTGAAAGAACAGGAAGGCAAGACCAAAgggaaatcatgcattctgaTGGAAAGGTGGAAAAAGTCAACAGCGACGGCTCTCGTCTCATTTCCTTTGCAAACGGtacaagaaaagaaatcagTGCTGACGGCCAGACCGTTATCGTCACTTTCTTTAATGGAGACATCAAGCAAATTATGCCTGATCAGCGAGTGATTTACTATTATTCAGAAGCGCAGACTACTCATACCACATACCCTGATGGACTGGAAGTGCTTCAATTTCCCAGCAAACAAGTTGAGAAGCACTACCGTGATGGAACAAAGGAAATCATCTTTCCTGATCAGACCATTAAGTACCTGTACCCAAATGGAGCGGAAGAATGCGTGTTTAGTGACGGTACCATACAAAAGGTTAACGTGGAAGGAGAGAGAACTATTGAATTCCCAAATGGACAACGGGAAACTCACACCAAGTGCTATAAAAAAAGAGAGTACCCTGATGGGACAGTAAAGACAGTCTATCCGGATGGTCGAACAGAGACCCGATATGCCACGGGACGTGTGCGGGTCAAGGATCGAGATGGTCGGGTTATAGTGGATTCTTTGAACCAACTAAGATGACAGCCCCTACTATGCAAAGATATTATAAAGTTGTATAtgagaaaattattaaaaacgAAGATACACTTGTCGTGCAAATAAGCCACAATTGTTAAGACGTGTGGGCTACACTCTACTGACGCCAGTGCTGCAGCGTTATCCCTTCGGATTCTTCCAATATATTTAGGCAAAATGGTAACCTATTTTTTCTTATCCTGACTCCTTTTAAGAACACTTGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07202 all species →	Tcp10_C	T-complex protein 10 C-terminus	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026581 all species →	Family	T-complex protein 10 family	Interproscan
IPR047002 all species →	Homologous_superfamily	T-complex protein 10, C-terminal domain superfamily	Interproscan
IPR009852 all species →	Domain	Centromere protein J, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10331 all species →	T COMPLEX PROTEIN 10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0061511 all species →	Biological Process	centriole elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11502	CENPJ; centromere protein J	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.