Gene detail

Detailed information of XP_073259081.1 in Porites lutea

Genomic Location: chr1:48899346...48903438
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073402980.1

GCCGTGAAAATTAAGCGTTTGGTTCTTCTCTCGTTTTTGGTTCTCCTTTTCGCAATTTTGGTGTTCAGGAGATATAAAATGGTAGTAGCTCGTGGTGTTGATCGGATCGAAACATCCCGACAGATGAGAGAAGGAGGCGGATTTCTGATCCGAAGACCCATCGGAGATAAAATCAACCAGTGCGATCCATTCTTGTTGTTAGATCATATGGGTCCTGTTATTTACGGCCCTGGAGAGGCTGTTGGAGCTCCTGATCACCCTCATCGAGGATTTGAAACGGTCACCTATCTGATTGAcgGAGAGATGAAACATCAAGACAGTGCTGGGAACAGTGGTGTTTTGAAACCAGGTTGGGTACAGTGGATGACTGCAGGGTCTGGTGTTGTGCACAGTGAAATGCCTTCAGATGAAGTTTTAAAGAAAGGTGGAAGATCAGAGGGATTCCAGCTTTGGGTGAACTTACCAGCAAAAGACAAGATGATTAAACCACGATACCAGGACACTGATGCTAAAAAAATTCCTGTAGTTACCAGCAAAGATGGAAAGACCAAAGTCAAGGTAATAGCTGGAGAGAGTTTGGGTGCAAAAGCTGTTATAGACACACGGACACCAATAATGTACCTTGATATCCAAGTGCAGGCAGGTGGAACATTTGTTCAGGATGTTCCTGAGGAGTATAATGGCTTTGCTTATGTTTGGAGGGGAAGTGGTTCATTCACTGAGGACAGAATCTCTGTTCAGATGGgaaagGTTGCCTTGCTGGGAAAGGGAAACACGTTTCAAATTACTGCAAGTCCTGATGAAGACATTCATGTTCTGCTCATAGCAGGTGTGCCAATTAAGGAACCCCTTGCACGTCATGGACCATTTGTCATGAACACTTGGGAAGAAATAGAGCAATGCTTCAGCGACTACCATGCAGGAAAACTGGGCTCTATTGAAGGATCTGAAGAGCGCTATGCTAAAACAAAGAAAGCAGTCAGTAAACAGAAAGAAACAGGGTCatggaataaaaaataaattgattgataTGCATATATGTGCAAGTAGATAATAATCTAGTGTTAGCGATCATATATTTTATCATTGGTAATAATCAAATTAGCCCAGCCAATTCATCATTGATTATAAACAGAAATCTCTAGTAtataaaaattctattgttttgcacaagtCAAAGTTCATGTAGTACAAAgattgttagttttttttttactaatacCACTGAGCTCAGAATTTCTGTGCCTTCGGGTGATGAAATTCTTTCTTGTTTAATTATAAGACCATTGTAAATCAACACAcaagtttttaacatttttttaaaagatcttaATTTGCCAAGAGGAATTTTTTTGCCGCAGCAATTGATTGAACATTTTCCATAAACAATCATCTGGTTGGTTAACGATTTTTATCGATGATAATAATGTAATGACCAGTGCACCACTGTTTATATTCTATAGTACTGGAAGTTCCGTTGCTTTTACTGAAGTCCTGTAAGACTATAATCAATGGGTGAAAGTATAGAAATATATATTATTTAGTCTCTCTGCTAACTCAGTTGAACATAATTCCTATTTTCGTGTGCCTTTCCTTCCCTAGGGACACAATAAACTATTTATTGGGATGGAATATTCATAATAGGCCAGTTTCAATATCATCCAAGTTCAGCAAGAAAGCAAGTCTTAGAGAACACAAACAATGAACAGGAATAAACAATGAATTTCTCTTACCTGTATGTGTCCTCTAAGAACTCTAAGACCTACTATTATTCTGAATTTTAAAGTATTAATAGAAAGTgaccttttttcttttagctaTTATTGAAAGTCATTGCAGGCAATGATGgcctttataattttttttttactatttttttacacgatatttaaaattttcaatgttttcaCCCAAAAATGCCCCATAATTGTAATGAGCAGACCCCAGGTCTTTGGTGCTGGTGTATATTTTTTCACTCATGCGTACATCTTCCTAGTAACAGAGTGAatcatgttttgttgttgtttaacttaaataaaaatacttttactACACTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05726 all species →	Pirin_C	Pirin C-terminal cupin domain	Domain	Interproscan
PF02678 all species →	Pirin	Pirin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012093 all species →	Family	Pirin	Interproscan
IPR008778 all species →	Domain	Pirin, C-terminal domain	Interproscan
IPR011051 all species →	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR003829 all species →	Domain	Pirin, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13903 all species →	PIRIN-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_073259081.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06911	PIR; quercetin 2,3-dioxygenase	EC:1.13.11.24	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.