Gene detail

Detailed information of XP_073259383.1 in Porites lutea

Genomic Location: chr12:23012494...23023058
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140953906

ATGGCGACCAAAGGGTTTCTCGTTGGAGATCACAGCATTCGTCCTCGACGTGCTGTGAGGTACGTAGCCAATAAACAAGCAAGTAAAACGACAAAAAGAAAGAAGAAGAAACCTGAATGGGATAATACAGTAAACGACCTGACTGTGCACAGGGCATCCAAGGAAGAACAGCTCAAAAGACATGAACTTCACAAATCCAAGAATACAACAAAAGTGCTGTTGCAAGGGCAACTCAAAGACTCAAGCCTAGACTCCACATTGCAGACTCCTGATTCAGTGGAAAGACGTAAACTTGCAATCGTTCAAGAAGTTTTATATGGCCATGACAAGTTTCAGGATGTGCTCACAGAGTCAGATAAAGCCATGTCAGTTGTTAAAGATTTGTTTGGTGATGACCCTAAGAAATACATGGGATTTCCTAATATCACTGCTGCCCCATCTCATGTTTTACGTGGCAAAGAAAACAGGTTTCCAGTGGCTGAGCCTCCAGAAACACCAACTCATCTGTCCATGTTGAGTGATTCTGTCATGCGAACACCAGCATTGAATGAGCTTTCAGATGACAACAAAGAAGATGATGAAATGGCACCAGGAACACCAAATTCTCATGAAATGCATCAAGCAAGATCTTACTTCCAACCGAAGCTGGATCTTCAAAGATTTCAGCAGTATGTGGCTGAAGAACAGAGTAGATATATGGAACAGCCTGAACAGCCTCATTTAAATGGATGTGGCCCTGACCACGTGGCATTAAAAGAGCAAGGCTCTGACCATCTGGCACTATATGGGCATGGCAATGACCATGTGACAGGACATGACAGCATGTTGCCTGGCTCGGCTCAGGACAAACCTGATATATATCCACATGCATCACAACCATATTGTTACCCGCAAGGAGCTGTAACTACAGTTGGTACAATAACAAATGACCAGGCCTTTGGCGCTTTCATAACTGGGCATGGCACTGACCATGTGGCTCCACCTGGCAGCGTGGCGTCAAGAACTGATCATGCTAGTCAGCAAGCAACTTTTCTCAGCCAGGAATCAGTGGAAATTGTCGCAGGATCAGGGCCTAGTGTTGTGAATCCAGTGTCCACTGCAGAATCAACTTCAAGCAACAGCTTTCCACCCAACTCAAGACCTTCATCCAGTCACACAGAAATAACTGAGCAAAGGTCCAGAAAAATTGAGAAGGCAGCTACCAGTGCAGTGAGTCACAAACCACCACTGAATTCTTCAGCAAGTGCAGGTGCAACTACCTTACGAAGTCTTGATGACTTAAAAAAGATGGTGGAACAATTGGAAAATGAGATAGCAGCGTACGAAATGGAAACAGACCGAACACCAACCCATGTTCCCACATCGTCTGGTTCTGGATCCTTCAGTGGATATACAGCTTCACTCATCACTGCTGTTACCAAGCTGATGGGTTATTTGAAGGAGAGTGAAATTCAACGTAAAGCAGAAATGATCATGAGAGAGCAAGTACTCCAGGGTTTTGAAGAACAAAGGGTTTTGGTCGACGCCTTGACCAATGATATACTTCACACTCAAGAGCAAAACTTGGCCTTACAACAAGAACTTCTGGAGTACAGGAAAACCACAGATGAACAGCTGCAATATTTAAAGAGAGAACTCTTTGCTGTTCTGAAGAGCCATGAATATCAGGAATTATCAAGCAGTATAAACACGCTGTATAACTTGAACCCTGTGACCTTGAAACGAGGGGCCTTAGATCAGGCCAGTGAAAATCATAACTTGGAGTACCTGCCTAGGGTTCCAATGCCCTGGGCTCAAAATACTGGTCAACAGCCTAACCTGCATGGAACAGTTACATCACAAGGGTCTTCTCAAGGACACAACCAGCCACAATACAGTCACAGTGACACTATGAAACAACCCTCATTCATTCCACTTGCAGATTCCCAGGGAACACACTCATCATTGCAACAAGTTAACCAGTCCCAAAATCACCATCTTCCTCTACAGTCAAATGTTCAAGTCACCACAGGGAATACAAATGACCAACAACGTTTTGTACCTCCAATGTCAGTTCCTGATCATGAATTACCCCATAATGGACATGCGTCTTTGGTATACAACAATTCTGTTCCACCTAGCACCATGCATTATGGAGTGACTAGTAAAAACCAGCTAAGTTCAAACATTGTCATGTACCCACCCAGCCAGGCTCCCTTGTCTGTGCCCCAAATGTCTATACCTAGTGTTCCCGGTGAAAGACCTGTTGTTTTGCCTGTAAGAAATCAATCAACTCATCATAGTAGTGTGGCTGTGCCCTTGGCAATGTCAACGGTCCCTCCGGTAAGAAATGAATCTACCTCACTTGTTAGTAGAAGTGAAGGTGTGGGCACAGCTCCCTCTGGAAGAAGTGAACCGATGCAATTTGGTGGCATGGAAACGTCCACTGCTTCTCAACCAAGACAGGAATCAGTCCCTACAAGTAGTATTGCAGGGGTCTCAGCAACGCCCGCAACTCTTCCTTTGGGAAACAAACCTGTACATGTCACTACAGTCACATCTACAGCTCCTTTATACAGTTCTCATCAGCATCAACCAGGGCAATCTGTCAGCAGTGCACTTTTGCAAACACAGGTTGGTAAGGCTGTGTCAAGGAGCTTGGAGCCAACACAACCATCAACTATTTCACAAGGAGTCAGACTCACAACTGTGTCTGAAGCAGTGCCCCGTATTGCAGCTTCTGGGCCAGGGCATATAGTGCAAGCTGTCACTATACCACCTGGTAAAACATCTCATGCACTACATCAGTATCAGCACCAGCCTTCACAGCAAAATTATGCTGAGCCATCTGTAAGACCACAACATCCACTCAAGCCCAATGGCTTTGCACCATTTTCTAGAACAACAGCTGGGAGTCTCCCTGCTGGTCATCAGCTACGTGAACGGCTTCAGAACCTGGCAAACAGGCAGAAGAGTCTGGCAGTTAAAGGTGACCAGAATGTTGGCAGTTTAGTGCCAACAGGACAGGGAAAGGGAGAAACAAGAGAAGTGCAACAACCACGCCCAAGTTCCCCTCACGTTCACTTCAAGGAGCCTCCAGTTGCTGGTGAAGGGCATGACAGTGCAAAAGAACATGGGAGAAAATCTCCTATGGTATCACCCATTCCACACAAGAGTGCTGTTGCAGCCCAGAGGTCAACTGTACCTTCTGATAACAGGGTTGTGGTGAACCTTCCTAATGCCTGGTCAGATGTGTCATCAACAATCTCACTGTAA

Transcript

rna-XM_073403282.1

AAACAACGGGACAACCGCGCGAGGGCAAGTCGGCCTCGTTTCTGATCTACCCACTGGAGACTGGATTCTACTTGGACGGCGGgaaatcaaaaataaatatgGCGACCAAAGGGTTTCTCGTTGGAGATCACAGCATTCGTCCTCGACGTGCTGTGAGGTACGTAGCCAATAAACAAGCAAGTAAAAcgacaaaaagaaagaagaagaaacctgAATGGGATAATACAGTAAACGACCTGACTGTGCACAGGGCATCCAAGGAAGAACAGCTCAAAAGACATGAACTTCACAAATCCAAGAATACAACAAAAGTGCTGTTGCAAGGGCAACTCAAAGACTCAAGCCTAGACTCCACATTGCAGACTCCTGATTCAGTGGAAAGACGTAAACTTGCAATCGTTCAAGAAGTTTTATATGGCCATGACAAGTTTCAGGATGTGCTCACAGAGTCAGATAAAGCCATGTCAGTTGTTAAAGATTTGTTTGGTGATGACCCTAAGAAATACATGGGATTTCCTAATATCACTGCTGCCCCATCTCATGTTTTACGTGGCAAAGAAAACAGGTTTCCAGTGGCTGAGCCTCCAGAAACACCAACTCATCTGTCCATGTTGAGTGATTCTGTCATGCGAACACCAGCATTGAATGAGCTTTCAGATGACAACAAAGAAGATGATGAAATGGCACCAGGAACACCAAATTCTCATGAAATGCATCAAGCAAGATCTTACTTCCAACCGAAGCTGGATCTTCAAAGATTTCAGCAGTATGTGGCTGAAGAACAGAGTAGATATATGGAACAGCCTGAACAGCCTCATTTAAATGGATGTGGCCCTGACCACGTGGCATTAAAAGAGCAAGGCTCTGACCATCTGGCACTATATGGGCATGGCAATGACCATGTGACAGGACATGACAGCATGTTGCCTGGCTCGGCTCAGGACAAACCTGATATATATCCACATGCATCACAACCATATTGTTACCCGCAAGGAGCTGTAACTACAGTTGGTACAATAACAAATGACCAGGCCTTTGGCGCTTTCATAACTGGGCATGGCACTGACCATGTGGCTCCACCTGGCAGCGTGGCGTCAAGAACTGATCATGCTAGTCAGCAAGCAACTTTTCTCAGCCAGGAATCAGTGGAAATTGTCGCAGGATCAGGGCCTAGTGTTGTGAATCCAGTGTCCACTGCAGAATCAACTTCAAGCAACAGCTTTCCACCCAACTCAAGACCTTCATCCAGTCACACAGAAATAACTGAGCAAAGGTCCAGAAAAATTGAGAAGGCAGCTACCAGTGCAGTGAGTCACAAACCACCACTGAATTCTTCAGCAAGTGCAGGTGCAACTACCTTACGAAGTCTTGATGACTTAAAAAAGATGGTGGAACAATTGGAAAATGAGATAGCAGCGTACGAAATGGAAACAGACCGAACACCAACCCATGTTCCCACATCGTCTGGTTCTGGATCCTTCAGTGGATATACAGCTTCACTCATCACTGCTGTTACCAAGCTGATGGGTTATTTGAAGGAGAGTGAAATTCAACGTAAAGCAGAAATGATCATGAGAGAGCAAGTACTCCAGGGTTTTGAAGAACAAAGGGTTTTGGTCGACGCCTTGACCAATGATATACTTCACACTCAAGAGCAAAACTTGGCCTTACAACAAGAACTTCTGGAGTACAGGAAAACCACAGATGAACAGCTGCAATATTTAAAGAGAGAACTCTTTGCTGTTCTGAAGAGCCATGAATATCAGGAATTATCAAGCAGTATAAACACGCTGTATAACTTGAACCCTGTGACCTTGAAACGAGGGGCCTTAGATCAGGCCAGTGAAAATCATAACTTGGAGTACCTGCCTAGGGTTCCAATGCCCTGGGCTCAAAATACTGGTCAACAGCCTAACCTGCATGGAACAGTTACATCACAAGGGTCTTCTCAAGGACACAACCAGCCACAATACAGTCACAGTGACACTATGAAACAACCCTCATTCATTCCACTTGCAGATTCCCAGGGAACACACTCATCATTGCAACAAGTTAACCAGTCCCAAAATCACCATCTTCCTCTACAGTCAAATGTTCAAGTCACCACAGGGAATACAAATGACCAACAACGTTTTGTACCTCCAATGTCAGTTCCTGATCATGAATTACCCCATAATGGACATGCGTCTTTGGTATACAACAATTCTGTTCCACCTAGCACCATGCATTATGGAGTGACTAGTAAAAACCAGCTAAGTTCAAACATTGTCATGTACCCACCCAGCCAGGCTCCCTTGTCTGTGCCCCAAATGTCTATACCTAGTGTTCCCGGTGAAAGACCTGTTGTTTTGCCTGTAAGAAATCAATCAACTCATCATAGTAGTGTGGCTGTGCCCTTGGCAATGTCAACGGTCCCTCCGGTAAGAAATGAATCTACCTCACTTGTTAGTAGAAGTGAAGGTGTGGGCACAGCTCCCTCTGGAAGAAGTGAACCGATGCAATTTGGTGGCATGGAAACGTCCACTGCTTCTCAACCAAGACAGGAATCAGTCCCTACAAGTAGTATTGCAGGGGTCTCAGCAACGCCCGCAACTCTTCCTTTGGGAAACAAACCTGTACATGTCACTACAGTCACATCTACAGCTCCTTTATACAGTTCTCATCAGCATCAACCAGGGCAATCTGTCAGCAGTGCACTTTTGCAAACACAGGTTGGTAAGGCTGTGTCAAGGAGCTTGGAGCCAACACAACCATCAACTATTTCACAAGGAGTCAGACTCACAACTGTGTCTGAAGCAGTGCCCCGTATTGCAGCTTCTGGGCCAGGGCATATAGTGCAAGCTGTCACTATACCACCTGGTAAAACATCTCATGCACTACATCAGTATCAGCACCAGCCTTCACAGCAAAATTATGCTGAGCCATCTGTAAGACCACAACATCCACTCAAGCCCAATGGCTTTGCACCATTTTCTAGAACAACAGCTGGGAGTCTCCCTGCTGGTCATCAGCTACGTGAACGGCTTCAGAACCTGGCAAACAGGCAGAAGAGTCTGGCAGTTAAAGGTGACCAGAATGTTGGCAGTTTAGTGCCAACAGGACAGGGAAAGGGAGAAACAAGAGAAGTGCAACAACCACGCCCAAGTTCCCCTCACGTTCACTTCAAGGAGCCTCCAGTTGCTGGTGAAGGGCATGACAGTGCAAAAGAACATGGGAGAAAATCTCCTATGGTATCACCCATTCCACACAAGAGTGCTGTTGCAGCCCAGAGGTCAACTGTACCTTCTGATAACAGGGTTGTGGTGAACCTTCCTAATGCCTGGTCAGATGTGTCATCAACAATCTCACTGTAAGCTACATGTATGCTGACCAAGGACCAAGGGACAATCCCCTCTTCTAATGACCCAATGACTTAAAGTACTCCTACATCCAAACAGGATGCACCTTGCTTGTACAGTTAAATACAAACCACGAAAGTAGCCGTTCAGTAATAACTTTCGAAAATATACTggatacatgtatataaaaatcACCAAGTCTTATTATACACTGTATGTATAGAACTGCCagacaaataaaaaatttaactaTACACAAGAAACTGTGATGATCCTTTTTACATTCACACATCCATGTGCCAGCTTCAACTCAGAAACTTAACAGATGGCACTAGCAGTACAAGTTAAGTATCTTTTTGTAATAACATATTCATTGTTGACTGCCAAAGAAAGCAATTACTAAGAGACAGATACATTAAGCTTTCTCTCTGAGGTCATGTAGACAATGACACAAAATGAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15678 all species →	SPICE	Centriole duplication and mitotic chromosome congression	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031387 all species →	Family	Spindle and centriole-associated protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31167 all species →	SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0005819 all species →	Cellular Component	spindle	Interproscan
GO:0046599 all species →	Biological Process	regulation of centriole replication	Interproscan
GO:0051310 all species →	Biological Process	metaphase chromosome alignment	Interproscan
GO:0090307 all species →	Biological Process	mitotic spindle assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16490	SPICE1; spindle and centriole-associated protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.