Gene detail

Detailed information of XP_074605876.1 in Acropora palmata

Genomic Location: NC_133882.1:16604561...16627634
NR annotation: XP_044176099.1, NACHT, LRR and PYD domains-containing protein 12-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074605876.1

ATGAAAAGAGGATCAATTGAAAGGAATGAACATGAGCAACCAGCAGGCTTTTCTAGGTGTTTTCCACTCAAAAGGAAAAGAGGATCAATTGAAAGGAATGAACATGAGCAACCAGCAGGCTTAGATGAGAGTGTGTCATTCAAGCCTGGGACCCTTTCAGAAGAGGATGTTCTTGTGATTGCGCATGAGCTTGGTCCTTCATGGAAAATGTTTGGCCGAGTGCTGAAAGTCCCGAATTCTGAGATTAATCGGATTGAAGTAAACGAGTCCGATGTCACTGAAAAATGCTATTGTGTTCTAAGACGTTGGCAAGATAGGTACCCATATGATGCAACATACCACTGCTTGGCACATGCATTGCAGCATCCCGTTGTTGGACGAGAAGATTTGGCTGCCAAGTACTGCGTTCTTCAATTAGGAACTTCCTCTGAGCCTGAGATCACAGCACAGGCAATAGAAGTAAGGGAGCCCAAGGGGAACAAGGAATTTACAGCTCGTACTTCGTCCCCAAGCCACATCATAGAATGGATGCCAAAAGTTTACCAGAAGCGTGAAGGGGTCATTGTGCCAGTGCCTTGGTGTGAAGAGTTCAGCTTTCACATAAAGGACATTTTCACCAGACTTAGAATGGTTGAAAAGGAAAAGACACGCGGAATAGTGACCTCAAAAGCAGTCACCAGCATGACAAGTATCTTTAGACCACACGACGGTTGCGAACAACCAGTGATTGTGTTGATTGAAGGCGACCCCGGCATGGGAAAGACTACCTATTGCCAAAAACTGGTATATGATTGGGCAAGCAAACAATCTCGCGAATGGGACGAGTCGTTTCCTAGAATTGATGTGCTCCTGCTCCTCAGATGTCGTGAAATCAAATCTGGTAACCTTTGGGACGCTATTGAAGATCAAATTCTGCCAAAAAGAATTGAACCGGAGGCAAGAAAAATGTTTTTTCAATTCTTGAAAGAAAATCCGTCCAAGGTGTTGCTTGTGCTCGATGGGTTAGATGAGGCAGACCCACAAAAACTCGAAATGTACTTGGAACTTGTTCAAAAGAAGGAGCTTCCTGGCTGTTACATTGTTCTCACATCTCGCCAGGAAGGAGGGAGTAGAGTGAGGCGGTACACTGATACATTGTTAGAGATTGTGGGATTCACACCGACTGATGCGGAGAGTTACATTAGAAAGTATTTTAAACAAGACAAAGCACACTTGGCAGAGGAACTTATTTCAAAATTTCCGTTGCATGTGGAATTAAAGGAACTAACACAAAACCCATTAAACACTCTTCTGTTGTGTGTTATCTTTGAGGACTTAGAGGGAGTTCTACCAGACAACAGGACGCAGCTTTACATGGAGATCATTCTCTTTATTTTGAGACGTTATGAAAGCAAGGAAGGCTTATCAAATAGAGGTAAAGACCTATTATTAGTTTACAAGAAGGAACTAATGATCCTAGGAAGAACTGCGCTAGATTCTCTGCGTAAACGAGAGCTGTATTTCGATGACCACAAAGGGGATATCAAGGAAAGTTTGTTGATGAAGTTTGGGTTTCTCTCCATCCAGTCTGGTGTTAGCAAGAGAGCTCCTTGTGACCGTTACGGATTTTTTCACAAGAGTTTTCAAGAATTCTTTTCTGGTTACTACCTTGCCTTTTCTATTATTGATGATGTTGCGAACTCTCAGTCAGTGCTGACCGATGATCGATACATGTTTGGACTATCTGAAGTTTTTAAGTTCATGAGTGCAATAATAGGCAAGGAATCCGTAGAAACTGCAGTGTCAGTTGTAAAACGTATTGCTTCAATTTTAAATAATGAGACAGGCCTAACTTTTGAAAAACTCTTTTTGTACTTAAGGGTTGCTGTTCGCTTTATTATCGAATGCAAAACTTTTTCAGGAGACCTTGACACAAAACTTGCTTGTACCTTTGGCGAAAGTCTAGAGTTGGTTAACGTGGTTTTGCACTTGCCCAGGCTTATGAGAGTGTGGTATATTGGGACGTTTTTCAAGGCCCTCGCCGTTAATTCCACCGTGAGAAACTTGGAGTTGTTTGGGGAGACTGAGGGTATCAATTCCTCCATTGGTGCTGAGGATATCAATCTGCTTACCAAGGCCCTTAGAGTAAATACGTCTCTTTGTTCTTTGAATTTGTCTAAGACCTCCATTGGTGATGAAGGAGCAACCTCACTTGCTCAGGCACTCAGAGTAAACACCTCTCTTTCTTCTTTGAATTTGAGTTTTAATTCCATTGGTACCAAGGGAGCAAATTCACTTGCTCAGGTCCTCAGAGTAAACACCTCTCTTTCATCTTTTAATTTGTCTCACAACCCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCATCTTTTAATTTGTCTTACAACACCATTTGTAATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAATACCTCTCTTTCATCTTTTAATTTGTCTTACACCACTATTTGTACTGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGACTGAATACCTCTCTTTCATCTTTTAATTTGTCTCACAACTCCATTGATGACGAGGGAGCAAATTCACTTGCTGAGGCCCTCAGAGTAAACACCTCTCTTTCTTCTTTTAATTTGTCTGACAACTCCATTGGTGCTGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAATACCTCTCTTTCATCTTTTAATTTGTCTTACAACTCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCATCTTTTAAGTTGTCTTACAACTCCGTTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCATCTTTTAATTTGTCTGGCAACTCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCTTCTTTGGATTTGTCTGGCAAATCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAATAAACACCTCTCTTTCTTCTTTGGTTTTGTCTGGCAACTCCATTGGTGCGGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGACTGAATACCTCTCTTTCATCTTTGAATTTGTCTCACAACTCCATTGATGACGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCATCTTTTAATTTGTCTTACAACACCATTTGTAATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAATACCTCTCTTTCATCTTTTAATTTGTCTTACACCACTATTTGTACTGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGACTGAATACCTCTCTTTCATCTTTTAATTTGTCTCACAACTCCATTGATGACGAGGGAGCAAATTCACTTGCTGAGGCCCTCAGAGTAAACACCTCTCTTTCTTCTTTTAATTTGTCTGACAACTCCATTGGTGCTGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAATACCTCTCTTTCATCTTTTAATTTGTCTTACAACTCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCATCTTTTAAGTTGTCTTACAACTCCGTTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCATCTTTTAATTTGTCTGGCAACTCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCTTCTTTGGATTTGTCTGGCAAATCCATTGGTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAATAAACACCTCTCTTTCTTCTTTGGTTTTGTCTGGCAACTCCATTGGTGCGGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGACTGAATACCTCTCTTTCATCTTTGAATTTGTCTCACAACTCCATTGATGACGAGGGAGCAAATTCACTTGCTGAGGCCCTCAGAGTAAACACCTCTCTTTCTTCTTTTAATTTGTCTGGCAACTCCATTGGTGCTGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGACTGAATACCTCTCTTTCATCTTTTAATTTGTCTCACAACTCCATTGTTGATGAGGGAGCAAATTCACTTGCTCAGGCCCTCAGAGTAAACACCTCTCTTTCTTCATTGGATTTGAGTTGTAAGTCCATTGGTACTGAAGGAGCAAATTCATTTGCTCAGGCCCTCAGAGTAAATACCTCTCTTTCATCTTTTAATTTGTCTTACAACTGCATTGGTGATGAGGGAGCAAATTCAGTTGCTCGGGCCCTCAGAATAAGTACCCGTATTTCATATTTTAATTTGTCTTACAACTTCATTCGTGATGAGGGATCAAATTCACTTGCCTAG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000067 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516 all species →	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF00531 all species →	Death	Death domain	Domain	Interproscan
PF05729 all species →	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052201 all species →	Family	Leucine-rich repeat-containing regulator of pluripotency	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR007111 all species →	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24111 all species →	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_074605876.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.