Gene detail

Detailed information of XP_074605909.1 in Acropora palmata

Genomic Location: NC_133892.1:4696031...4713908
NR annotation: XP_029189718.2, trinucleotide repeat-containing gene 6B protein-like [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074605909.1

ATGCCAAACGAAGGAAAGAAAGAGCACCTCAAGACATTAGGAGTCGATACTTGCTCATCTGAAAATGAAATCAAGAAAGCTTATAAGAGACTCGCTCTTCGGCTTCACCCAGACAAGCTACAGAATGGTGACTTTTTGGACAGAAAACAGTTTGAGGAAGTCTGTAAAGCCTTTGAGTCCCTCTCGCCAGAGTGCAGAAACGACTCAATCAAACAAGATTGCGACCAAGTTTTCTTCGATTTCCTCCGGGACATCCTTGGTTGGAAAGAAGACTCTGAGAATGCAAGGCCTGGTAATTTTTTGAACTTTTTCTGTGGGTCAAAGCAGCATCTGTGTTCAAGTGATATGGATTTTAATGCGAGATACCAAGATAATGCAGATGAGGATGACATTGATGGAGAGGGTGATATAGACATTATAGTGGAGATTATCAAGAATCGAAGAAAAAAGGGGAAACATGTTCCAGAGGAGTTCAGAGAGGAAAATTTATTGGATATGAAGACCAAATTAAACCAACACAAGGAAGATTTGAAAAAGGATACCAGCAAAAAGCAAACAAGTAAGAAAGGAAAAACACCAGTTCCTGTAGCCAAGCCAAAGCCTAAGACAAAGAAGCAACTACAAGCTGAGCAAAGACGAAGAGAAAAGGAAATGGAAAAGATTGCAATAGAATTGGAAGAGAAAAGGAAAGAGGATGAAGAGAAAGAGAAGCAAAGGAAACAGCTGGAGATGGAAAAACAGAAACGCCAGGAAGAAGAGAGAATCAGGGCACAGAATGAAGAGAGGAAAAGGCGTGAAAAAGAACAAAAGGAGCGTGAAAAACAACAGAAGTTAGAACAAGAAAGAGAGGAGAAGAGACGTCGTCAGCTGGAGGAAGAGAAGAAAAGAAAAGAGGAGGAAGAGAAAAGAAAGAAGGCTGAGAAGGAAAAGGCTGACAAGGAGAGAGCGGCCAAAAAGGCTGCCCAACAGGCTGCAAAAGAAAAAGAGGATAGAGAAAGAGCTGCAAACAAAAGCCAGAGCCTGAAAAGACAGCAGCAACAGCAGCGGACAGATCAACAGCAGTACCCAAGAGAAATACCACCTCGGTTTCAAAAGAAAATGAAACAAAAGGAGCAACAACAACAGGCACAGTACCAAGTACCTCAACAACAACAACAACAACAACAACAGCAACAAACAGTACAACAACCAACAGTTCCTTCACAAACAAAGGCTCTTCCAAAACCTCAACCAACAGTTGGAAAGAAGAAAGACCCAAATCGTTTCGCCTCCAAGGAATACGCGGACATTATTGAGCCAATGGATGACTCAGGGTGGACCCAGGCTGCTCCCGGCAAAGGATCAGGCTGGGGTAATTCGTTGGACACTTGGGAGGACTCTGATAAATGGGGTGCAGAAGACAGACTATGGGGCAATAAAGAAGGGACATGGGATAAACTTGTTGTTGATGAGGGTAATAAGGAAGCGTGGCCCACAGTTGGATCAAAAGGAACAATTGGAGATAGGTTAGACTCTTCGGGAAGTAACCCTGGCTCTGAAAAGGGCGAGCTTTCGAAAGAATCTTCTCCGAAAACGTCTGTCTCATCCTCGGGTGTTAAACTAGAAAACTCTGGATCTGTGGTTCAGGGAAATGTTCTTTCTAATGTGGACAAAAAGTCGCGGCCTTCTAGTAATTGGTCGGAGGTGTATCCGAGCCCATCTGAAAACTGGGACATTATTGATGACTCCATTGATCAAGCTATTGACGCTGCGGATGCAGCTAGTGCGACGGAAAACAGTTTGCTGGCTGCAGGTTGGGGCGGAGTTGCAAAGGGTGGGCTGGGGGGGATTATAGGAACGAACTCAAACTGGGAACATGGATTAAATCCTAAGGACTCTGCATCGTCAGCGATTAGCAGTGAATCTGCAAAAGGTGGGCTTTCGAGCAGCATTGATGGGTCGAATACTGCGGGATGGAATAAAACACCTGGGAAGGGCTCAAAGCCAAAACAACAACAAACGGAAATAAGTGGAGGGAGTGTCAAGGTGACCGCTTCATGGGGTGGAACCCCAGCTGAGTCTGAATTAAAATGGACCGAATCTAATTCATCGTCAGGAGGATTAAACACTTCAAAGGAACCTAAACCACCAAACATAGACCCTAATAATTCTGTTTTTAAATCTGAACAAACTGTTACGCAGAGTTCAAGCGCTAAAATGACTGCGACAGGGTGGGGTGACACACCCGCTCCTAACTCGTCGAATTGGGGAGCTCCTGCAGATATTACGGGAACGTCGTGTTGGGACAATGTTGCACAAAAATTGGAGTCCTCTGACTCAAAGGCTTCTAGTAACAAGGTTTCTCAATGGCTAGAAAGCACAGGGCGACCATTAGGAGATTTAGTTTGGGGACAAGAGAATGTGGAACACGAAGAAGGGTCCGAAGGATCTTTGGATGGGTGGACAACGGCTTCCAAGCGAAACAGGGCCCCTAAACCGACCAATGATTCGAATGCTTGGATGAGTAGATCCCTAAAACAATTGCTCGACATGGGCTTTAAGCAGGAGGATGCCGAAAAAGCGCTGAAAGCGAATCACATGAACATAGAGAGTGCAATAGGTGATCTGCTGGCCATGAACATGAGGGACAATAGAGAACAGCTCTCAGCACTGGCCGCCGAACCTGATCCAGCCGAAGCTGCAAAACTTCAACAACAACAACAACAGCAGCAGCAGCAAACTCAGAATAAACTGAACAGAAAACAACGCCGAAAGCTTCAACAGCAGCAACAAGCTGAGGAACAAACTCCTGTCGTATGTGTGCCCGATATCAAACAACCAGCAGGTGAACTTTCCGTCTCTCAAGCCGTTACTCAGTCATCTGAAACACTTGCTGACCAGCAACAGAACAAAACTATAGATAGTATCTCTACGTCTACGTACAAAGCAGAAGATTCCCAAGGGGACACAAACAATACACACACTGCCACACCTACCACAAAGAATGATAAACCCGAACAGTCAGTTGCCGGTGCAACTAAACCTGCAAACGGACAGCAAACACAGTCATTAGCGAGCAGTAAGAGAGCTGGTCCTCCATTGATCCCCCCTTCGCCAGGCCAAGGGGTACAAGGGCCACTGAGGGCGTCTTTAACTCATCCTTTGCTTCATCCTCAATTGGTACAACAGCTACATTTGCAACAGTTTCGGATGGCCCAGGGGGGCCTGTTGCAGCCTCCGTTCACAGCGCAGCAATTTGCATTACTGCAACAGATTGCTCAGTTGCAGCTCGTTCAACAGCGCCTTGCTGCGCAATCAGTTGCACAGCAACACTTGGGACAGAAACAACAGGTCATACCTCAGCAACAACTCTATCAGCAGCAGCAACAGATTGCACTCATGATTGCTCAGATGCAGCAGCAGCTCCTTCAACAGCAGCCCGGTTTGGCAGGGAGACACCCTACACTGCAGTTTACTGGGGTACAGCAACCTGTAACTCAACAGCCTCAACAACAGCCTTCTCCGACATCACAACCGAAAGTCAGTAAACCCTTGAATAGTAGTGACAAACTGGCAACTGAGTCTCGACAGACTAAAGCCGACACTGGTAAAACTCAGGTGAACGAAACAGTCATTCCTCCTCCTGCAACAGTGGAGGAACAAGCCAAGCAACATTCTCCTGTTCCGCAATCACGACTTACGCAGTGGAAGCAACCGTTACTGCAAGATCCAAATGCAACAGTCGCGCAGCCTCCAGTCTCCAGCACACCAACTTGGTCGCTCTCTAAGCCTCCAACTGCCTCTTTATCGTCGTCTTCTCAGTCTGCTCCCGCCATGCTACCCAATCTTGTATCGGCTCCTTCTGTTTCCACTGGTGATGGGTCTGATCTTCAAGCTTCCAACAGCAACACTGTATCTCCGCGTCCAAGGATTCCTGACCCTGTGTCCAGCAGGTGGGGTGTGGATGCAGGCCCCAAGCTGTCAGCAGATCCAACCGAATTCAAACCCGGTGTGCCATGGCGTCCTGCCCCAAAGAATGAAAAGAGGGAAGAGGTTAGAGATGCGGATTCGTCGAGCGCGCAAGAGGTGTCAAGTCGGTCGTCATCTTCAAGCAGTGAACCTCAGCCCGAAAAATGGGCTGCTGCTGCTAACCCCTCAGCGAATGCTGCCAACAATCTTCCTCCCTCAGTCGCTGGAAAAACGTCGGATGAGACACGTAGCACAACACCAAGCAATGGGACGGGACTTTCAATCAACAGCAACGGCACGTTTGATTCAAGCAAGGATGACTTTGGTTCGAAATCAGCGTCTTGGCAAGCAAACGATGATAAAACACCACCTCCACCTTCCAATCAGGAAGGAGACAAGCAAGCCTCGAGTGTCTTATCCACGCTACGACCCCCTCCGGGCCTTGGAACCGAAACCACTCTGCCAGAATCACCACTCTTTGGAGATGACCCTCCAGCCTGGCTCAAAAGTTTGATAGACAGTGGTTTCAATGGCGACAAGACACAACCAGAATTCCAGTTCAGTCGATTTGGCTTTGCCAATCATTCTGCTCCTTGGAGTCCTCGAGATAAAGGAACGCAGCCATTCAGTCCCACATCGCCAGATCCTCAACCCTGGGCAGCTGTAGGGGGGCCAACGCCAGTCTCATCAACTTCTAGCCCAACAGTTCTGTTGGCGAATAATAATAATGTCGCTTGCATTGAATCCCCAACAAATCTTCAAAACTCTGGCATCATCTGGTCCACGAATCAACCCATTCCCAGCGCAGAAGAGAAGTTAACAGGAGTTCATCCTGGGGCAGCGTCAGCTCCTCCTGTTTCTATGCCAAGTTCAGTGGCTGCCTCCAGAAGCACGCCTAATTCCATGTCAACTTGGTTGGTGCTGCGAAATTTGTCACCAAGGATGGATCACAAATCTTTAAGACCCCTTTGCGAAAGACATGGCCCTTTGCTTACATTCCAATTAAACCTTCGCCATGGCAACAGCTTGATTCGCTACGGTAGCACGGAGGAAGCCGCAAAAGCAAGGATGACACTAAATGGCTTGATGTTACATGGAACTCAAATGGCAGCTGATTTTGCGACCGACAGTGACATCGGCAGCTTTTTCGAGCAGACCATGGATTGGAGTAATAATCCGTTCCCTAGCAACACATACGGCAACCAGTGGTCCTTTCAGAGCATGCTTGGCGCTAGCGCGCCAAATAATATCCCAACCCCTAAAGCTCCACTCGCTAACAATCAAGTTCTAACTGAGCAGCCCTCTGCCAAGCAAAGTAATGCCGCCCTTGGAATGCAATGGGGTGCACCGGTAGGACACATGCAAGTCCAGGCAATCCCTGCTTTAGATCACACCAAAGGAATATTGCCTGTGGCCCAGTGGGGCAGCGGTCTGCAAGCCACTGAGCAGCTCGGAATGAAAGCTAACAGTTCAATTCCCAATATGCAATGGGGAAGTGCGCCAAGGGGTTCCCCTGCCATGGCCCCATCATACTTGTGGGGCTCAGGCCTCACGCAACAATCCCCGGGAGGTAATTTTTCTCAAGTCCCCAGCATGTGGTCATTTCCAGCCGGGGTCCCGCGGGATGCGGAACCTCAGTCGGGATCCGGTGATGGGCTTGTTAGTCCTTCAATGACTACGTTTCTTCCACCTGGGCTTTTAAACGGTGGTGGTGACACGATCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UHK8	Trinucleotide repeat-containing gene 6A protein OS=Mus musculus OX=10090 GN=Tnrc6a PE=1 SV=2
Q8NDV7	Trinucleotide repeat-containing gene 6A protein OS=Homo sapiens OX=9606 GN=TNRC6A PE=1 SV=2
Q7N8Y3	Chaperone protein DnaJ OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=dnaJ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008140 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052068 all species →	Family	GW182 domain-containing protein	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR041917 all species →	Domain	Trinucleotide repeat-containing gene 6C protein, UBA domain	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13020 all species →	TRINUCLEOTIDE REPEAT-CONTAINING GENE 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000932 all species →	Cellular Component	P-body	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0035195 all species →	Biological Process	miRNA-mediated post-transcriptional gene silencing	Interproscan
GO:0060213 all species →	Biological Process	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18412	TNRC6, GW182; trinucleotide repeat-containing gene 6 protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_074605909.1 across 84 RNA-seq samples of Acropora palmata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

84Samples

75TPM > 0

2Conditions

51.2Max TPM

22.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
all_coral_tissue · exposed	46	40	19.58	43.30
all_coral_tissue · baseline	38	35	26.48	51.23

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR8800075	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	43.30
SRR8800105	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	40.12
SRR8800051	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	38.24
SRR8800077	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	36.51
SRR8800068	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	36.18
SRR8800044	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	34.80
SRR8800080	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	34.23
SRR8800045	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	34.19
SRR8800056	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	33.11
SRR8800100	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	31.53
SRR8800099	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	30.31
SRR8800071	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	30.15
SRR8800097	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	30.05
SRR8800093	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	29.64
SRR8800053	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	27.47
SRR8800083	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	26.55
SRR8800036	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	26.06
SRR8800034	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	25.95
SRR8800092	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	25.50
SRR8800079	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	24.51
SRR8800038	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	20.60
SRR8800073	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	15.94
SRR8800095	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	15.52
SRR8800094	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	15.38
SRR8800058	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	14.90
SRR8800040	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	14.73
SRR8800062	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	14.06
SRR8800063	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	13.72
SRR8800087	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	13.43
SRR8800033	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.76
SRR8800060	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.59
SRR8800065	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.45
SRR8800027	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.35
SRR8800026	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.29
SRR8800091	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.17
SRR8800088	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	12.16
SRR8800028	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	10.69
SRR8800089	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	9.52
SRR8800107	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	8.63
SRR8800047	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	8.58
SRR8800029	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800039	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800042	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800061	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800066	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800086	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800052	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	51.23
SRR8800108	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	44.25
SRR8800057	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	42.11
SRR8800035	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	41.62
SRR8800069	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	41.21
SRR8800074	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	40.28
SRR8800067	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	37.31
SRR8800043	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	37.21
SRR8800096	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	37.05
SRR8800041	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	36.30
SRR8800050	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	35.90
SRR8800082	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.73
SRR8800032	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.58
SRR8800076	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.43
SRR8800106	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.04
SRR8800072	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	32.69
SRR8800078	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	31.20
SRR8800048	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	31.03
SRR8800101	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	30.79
SRR8800109	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	28.20
SRR8800081	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	27.29
SRR8800098	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	24.43
SRR8800037	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	24.27
SRR8800049	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	24.24
SRR8800103	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	22.58
SRR8800070	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	22.39
SRR8800064	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	17.00
SRR8800104	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	16.10
SRR8800059	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	15.74
SRR8800085	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	15.11
SRR8800102	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	13.81
SRR8800031	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	13.59
SRR8800090	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	12.26
SRR8800030	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	10.98
SRR8800084	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	10.29
SRR8800046	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	0.00
SRR8800054	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	0.00
SRR8800055	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	0.00

Source: CnidoSite RNA-seq expression matrices (APALM_TPM, StringTie quantification over 84 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.