Gene detail

Detailed information of XP_074606622.1 in Acropora palmata

Genomic Location: NC_133893.1:590917...598619
NR annotation: XP_015757365.1, PREDICTED: uncharacterized protein LOC107336814 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074606622.1

ATGTTCTTTTCATCAGGCTTGGCTCAGCGTGGAGAAGATGACGAAGGCTTTGATGGATTTTTGATTAAAGATATCAAAAAAGAAATAACAAGGGCAAAAAGATTGAGGTGTAATTTCTGCAAAAAGCCTGGTGCTTCTATCGGTTGCTGCGTTGAAAAATGTCATCAAACCTACCACTATAACTGTGGCCGCCAGAGAGGATCTCTTTTTCAGTTCTTTGACAGTTTCAACTCATTTTGTACATACCATCGTCCAACCCAACAAATCCATTTAAGAGAGAGTGACGGCAAAAATTGTCCAATCTGTTTGAATGATATAGAGTGGAACAGTTGTCCTTTTCTTGCTGATGTGCCTCTCCTTACACCTTGTTGCAAAGTGTGGTTTCACAACAAATGCCTCCAGAGACATGCCCATTCAAGTGGATTGTATTACTTCAAATGCCCCCTTTGCAATAATAAGAAGGAATTTCAAGATGAAATGAAAAGAATGGGTGTTTACATACCAGAACAGGATGCTAGTTGGGAAAAAGGGGATGCCTTTGCAGATCTTTTGTTTCGATACAATCGCTGTGATGCACAAAACTGCATCTGCCCTCATGGGAAAGAACACAAAGCAACTTCAGGAAAATGGCGCATTCGTCTGTGTGACTTGTGCGGCCAGTTTGGAACACATGTAAAATGTCAGCACTGGAAAAGGGCACCGGCAGAATGGTACTGTGATGTATGTGGTAACACACTGCCTTATTCTAGTACACGCAAAAGACCTGTTGTGGGTGATCACTCTATGGACCCATGCTTTGGCAACGTTGATGATAGCTCTTCAGATGAAGACTGTGAGGTCAATGTATGCAGTGTATCTGATGAAGAAATGCCTCTTGCAACTGTTAAGAGGCAACCAGAGGGGCATAGCAGCACAGAAGGGCAGCCATGTTTTGAAAGGGCATCTGGAGCAAGGGGCCAGCATAAAGAAGCATCGCAGCAAAAAACAATGGAGAAATGTGAAAGAGACCCATCATCTGAGACGAGAGAACATGAAACATCATCCCACAGCAGTCAAGTGAAAGATAAAGGGTCTCCTTTGAGGAAGTGCCAGCAGATTTCAACCAAAGGAGGAAATTCATGCTATCCCAATGAAAAGGAGCTTATTAGATCAAATTCTGAAAACACTGTTTGTTCACTCAACAAATTAGTTCTAGATTCCACAGAAATGACACCCTCTGTGCTACTTGCAATTTCTGAGTCAGTTAGAGAGGGTTTACTAGATGGGCATACTGTGGTAGGGGATAAAACATCTATCTTGTCAGTAAGTGCAAAAGTGGAACACGTTACTGAGTCTCCTAAGAGGAATTCTGACAAGAATGAAGTTATTGTTATAGAAGACACAGACTCGGAATCTTCATCGGAATATAGCGTGGAACTTATAGAGGAACATCAAAAACCCAGAAGTTCCCACAGGAAGAGAAGACGTAAAAGACGTAAATTAGACAATAGTGTGGACCTGGTTTCCCAAGTAGAAGCAGATTCAAGTGCTCCTTTAGTTTCTGTTGAAGTCAAGAAAGAAATGCTCTCAGAGCAAGGTTTCTTAGATTTGTCATCAAAGAGAGAGGCTACCATAAACTACATCCATACCTGTCTTCACCCAAAAGGTGCAAGAAGACGCTGTCCTCTTGGAAATGACAAGTTTGGTGAGTGCTTCTTGCGGTGCTGCAATCCAGGTGTGTACAGTGTGCCAGATGTTCTGGTAACCAACTCCGTGCGAGCCAATCGCAAGTGTGGGGCCTTACAGAGTACCACTGTTAGTAGCACAAGCAGCTCTGGTCAGAGAGACACCTGTTCAATGCAGGATCAAACAAGGGATGAACCAGCTGCAGGCAAAGAACTTCGCTCCATAGGCACCAACACTTTGCCCATGAAATTAATCTCCAGGAAACGTATTAAATCTAAACAAACTGCTATCATAGATACATATTTCCCCATTGGAAAGAATCCTGTTTCCACCTTTAGCCAGACAGTGAGCTAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q5F4A1	G2/M phase-specific E3 ubiquitin-protein ligase OS=Gallus gallus OX=9031 GN=G2E3 PE=2 SV=1
Q7L622	G2/M phase-specific E3 ubiquitin-protein ligase OS=Homo sapiens OX=9606 GN=G2E3 PE=1 SV=1
Q5RJY2	G2/M phase-specific E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=G2e3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13771	zf-HC5HC2H	PHD-like zinc-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034732	Domain	Extended PHD (ePHD) domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR051188	Family	PHD-type Zinc Finger Domain-Containing Protein	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12420	PHD FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala