Gene detail

Detailed information of XP_074606803.1 in Acropora palmata

Genomic Location: NC_133893.1:9914897...9975865
NR annotation: XP_029205586.2, LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR5-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074606803.1

ATGCCAAGCATTCATATTGCGGTCTATCCTTTACCGAGAACAGCTGAGGAGTTACACGAGAGGTTAAAAGAAGTTTCAGAATTGAAGGAAAAACCAAGTTACCTAAGTTCCCCAATACTTGAGGCTCTGAAAGGTGAAGTTATCAAAGAATGTGTGGTTGGACCCAGACATGTGGCTTTTCTTTTGGAGAGTGGACAAGTTTGCCGGGTGCCTTTCACCCTTCACCCAGACAAGCTGGAATTGACTTCAAGAGATTCATCAACAGGAGAGGAAGAAAACAGTAATTCTGCTGCAAGATCAGCGTCTCATATAGTGTTACATTCAGGTGGTGGATCAAGGGGCCAAGGTGAAAATTCATGGGTTCTTTCCAACAGTGGAGAGACTCTTAGTGGATTAACAGGACATCCAGTCATCAGTCGCTGGGGTGCTGCCCCATCTGCTATGTCTTTGCGCACTTCTAGTCGTACACCTGTTCATGGGCGTGGCCGTGTTGTAAGAAGAGGTGCAAGAGGGGGAACATCAGGATGGGGTATTGGCTCTCGCGTTGTCCCTGCAACAGCTGTCCCAGAGGAACTCGTTAATCAAGCTCAGGTTGTCCTTCAAGGAAAGTCAAGAGCTGCAATAATAAGAGAGCTGCAGAGGACTAATCTTGATGTCAATTTAGCTGTTAATAATCTTCTTAGTCGTGATGAAGATGATGGAGATGACGATGAAAACCCTGAATACCTTCCTGGGGATGACCTAATGTCATTGTTGGATGCTGGTGTTCATGTTGATGATCCATCATTTGTTGTTGACCCTGAGGCAATATTTTCTGAAGACATGTTCTACAGCTCACCTTATGGAAGTCTTCATCGTCGTGGTAATAGCAGTGCTAGAGCATCCAGAACTGCTGTTGAAAGGGAGACAGACCGTGAAAGGGAAAGAACAAGAGAAAGAGAGGCTCTCAGACGGGAGAGGGATCGATGGTTGGGTAACATACACACTGGAAGCTTGGACTGTGTATCTTCTAATAACACATCTAAGCAAACTGTGCAGGACAAGTCATCTGCAAAGAGTTTCTCTGCAGAACCTGTGAGTGTGGCAGACCTTCTCCAGTGGTGGCAGCCAAATTTGGATGGTAACTTTCCTTGTTTCATCCACATTGCTGCAATGTACTCTGAGCTTGTATGTGTTGGGGCTGATGGTAAGCTTTATCAATGGAAATGGGAAGATCCTTTGCCTTATCAAGATCAAGGTAATGCTGTATATCATCCTAGAGCAACAGCCCTTGGTCTCACTGATGAAAAGGTGGTGTCACTATCAGCATCGTCCATAAGAGCATCTGCTCTTACAGAATCTGGCAAGGTTGCTACTTGGATGGACGAGACCCTGAGCTCCATTGCCAGCAAACTGGAACATTCTGCTCAAGGTTTTACTGAGTTCTCTGGGGACAAGGTTGTTGCTGTTCATACATGTTCACTTTACACATGCACTCAAATGTCCTCAGGAGCACTTTACTGGTGGGGCATCCTTCCATTTGAGCAAAGAAAGAAGTTATTGGAAAAAGCTCGTGCAAGGGCACGTAGAAACCGCACAACCTTTACCAGTTGCATAGTAAAAGGTGTTCAGGTGTGCCTGCGCAGTTGTCCTTTATACCATGCTGGTTCAATTGGATTCAATATCTCCTCTGGGGTGCCTCGCATGGGACAATTAATTGAGTCTGCCTGGAATTTAGATGAGAAATGTCGATTTAAAGTGTTACCACTTGGCAATGAAAAAACTACTTTCAACCCACCTCCTCTTGAAGAACATGATGCTGATGTTCCTGGCTCTCTTGGACTAAAGAGAAAAAAAGATCCAAGTTTAGAAGCTGCAGATGACAAGTCCATTCAAGACTGGGATCTAAAGGATGTTATATTTGTTGAGGATAAGCGAAACATACCTGTTGGAAGAGTGCTTAAGGTTGATGGCCCATATGCTGCTGTGAAGTTTCCACCAAAGGAAAGTGGTCCTCAAGGGACAGCTGGAAGTGGAGTCAGTGGCAATGATGAAGCTACGGCGCTATTGCAAGATGTGCGCCTTCTCCGTAAAGATGAGTTGCAGCTGGTGAAGTCGTCTGCTGCCAACAAGATCCCTGACTGTATTCAGCGTTCACCCAAGCTGTTGTATGTACCTCCAGGCACAAGACCTGTTGCTGTAACTGTTAATTGCAAAGGAGTTCATGCAATATTGAAGACATCGTTGGGTGTTCGTTATGCTCTGTACAGCCTTGCATCCTCCAAACCAGAAGCTGGAGGAACCATGCCAAAAGTTTGTGCAGCTTTTCTCAGTCAACCAGCCTCACAAGACATAAAGCTTTATCCAACGGGTGATGATTCTCTAGTCATGATGACTGATGTAAATGGTGCTCTGTTTCCTTTGGCAAAGAACTTTCTTGGCACTGTCAAAGATCCAGCATGGATGGATATTCCTCCATTGCAAAGCCTTGGTGTAGGTGTTACATCACTGAGACCTGGAACTGACTGTAAATCCAGAGCTCTTGTAGTTGTCCTTGCTTTGCAGAGCCAGCAGTTGATGCCACATGTTCTCAAATGTGACTTTGATGCCATAAAGCATTTTCTGACATCATTGGAGGAAAATCCAGCACAAGGAAAAATTATTTTAGAGACAGCTTTGCAAGAGAGGTGTGATGGTAACAGAAACATTATTCATGCTTGTGTATCCAAGAGTTTCCCTGTGTCTGCTCATGAGCCTGGTGAAACAACAGATTCACAGCTCAACAGTGGAGCAGGTACAAACAATGGCGCTCTTGGAAATAAGCTGGAATCTATTAAGGGTGCGGTAGATGCTCTTGCAGCAGCAGTGGCAGCAGCAGCAGCTGTTGTTCGTTCAAGTGATGGTGCTGTTGCTTCACCAGGTAGTGGCAGTCGAGCTGGCTCTGGGGCCAGTCCTATTGGGAATGGATCAGCAGATGATAGTGGGTCATCCAGATTGGGTGTGTGTGAGATGATGCAAAGAGCAGTCACTGCAGCACGATCTTCACTACTTGAAGTGGAGGATGATGCTGCTATTCCTACTTTACATTGGCCCCCAGATGGTCCAGATCAACAGGATAATGAAACAGGCCCGGTATTAAATCCGGCATCAACAGCATCACCAGCTGCCACAGGGGAATCCTCTGCATCTGCAGCTGCTTCTGCTGCTGCCGCTGCGACAGCATTATCTGCTCCAGCAGTTACAAGCTCTCCCTCCACACTAACAGGATCCAATCAAGTCACAGAACAGACTCAAAGGAGCAAGGCTCTTCATTGCCTCAACTTGCTATGTGAAAGTGCATTGTTAGCTCCATGTCTTCTTCAACTAATGAAAGCAAAAGATGCAGATGGCTGTACTCCATTCATGGCTGCAGTGCGTGGCCGTTCCTATCATGCTGGACTTACTCTCTTTGCCAAAGCACAGAGTCTTGCGACCAATGAAAATGGACAATTGGACAAGAGTACCTTCATGGCAATGTTATATCCTACTGATAGTCATCCAGATGCTTCTCCTCTTTACATGCTCTGCTGTAATGATACATGCTCGTTTACCTGGACTGGTACAGAGCACATCAATCAAGACATTTTTGAATGTCGCACTTGTGGTCTGACTGGTTCCCTTTGTTGTTGCACTGAATGTGCCCGAGTTTGTCACCGTGGCCATGATTGCAAATTGAAGAGGACAGCACCAACTGCATACTGTGATTGCTGGGAAAAGTGCAAGTGTCGCGCCTTAGTGCCCGGCTCTCACTTAGCACGTATTCAACTGCTTAAAAAGCTTGTGTCAGAGACGGACTTGGTTACGAAGCCCAATGGCAGAGGGGAACATCTAGTATTATTTTTGGCTCAGACAGTGGCTCGCCAAACTGTTGAACAACGTCAATTTCGACCACTTCGCACATCTGCAGAGTCTCGCCCCAAAGCAAAGAGTAAATCGCTTGGAGCAAGTGGAACAACCCCACCCCTCCCTGATCATGATCTTAGTCCTCCAAAGTTTGCACGAAGGGCTCTTGAGTTCATCCTACAAGAATGGAGAGCAGTGGGTGCAATGATGAGAGATGGATATAACCCAGTTACAGAATCCAGTGCGGGAAATCTAAACTCGAGCCATGTGACAGAACAGAGGAGTCGTCTGTCTAGCCAACCAGGAACTGTACGACTGGATGCGTTCACACATTGTCTTCTCGCCAAGTGTGCTCCTGAGATACTGGATCCTCTTCTGCTGACACTCAGAACTGCAATAGAAAATTCTCCTGATCCTTACAAATGTGAAGAAACAACTTTAGCACTGCGCTTCATCAGATCAGTAGCCAGAGTTTTTGTTGTGCTGTCATCTCAAATGGCTCCTCCAAACGGCAAACGCAAAGTAGGAGTTGTTCAGCCCTTGATGAAGTGCCGTCGCGTGTTTCAGTCTCTATCAAGCTTGGCTATACCTGAGCTTGTTAAAGTAGCCGATGCATTACTGGCTCCAGTGAGACTGGGCATCTGTCTTCCCGCGCAGCCTTTCAGTCTTCTGTCTTCCACTCTTGAAGCTACACAGTCCAGTGAGGATTTGTTCACAGTGGAGCCCTTGTCTATGAGAACTTCAACACCATCTTCAGTTGAAGAAATGCCATCGCAAGAGAGGCCGAGTGTACAAAGAGCACGGAATCAAAGGCACAGAAGAAGACCGGTTGGCAGCATCCCTCGAGCACAGGGTCAGAATGCTGCACCAGTGGAGGGAACTGGTGCTGAAGGAGAAGAAGTGGAGGTTGTTGAAGGTGGGGAAATGGAATCGGAGAGCCACGAGGAAGCTGGAGATGAGGAAGTTGAAAGTGGTGCAGCTGGTAATGAATCTGATATGGATCTGGATCTACTGGCTGAGAGTGAAAGTGACAGCGAAGAAAGTCAGGTTGGTGAGGTTCCTGTTGTTGAAAGTGTTCGTCGCAATCGTGTTCCGGGTTCATTGATTGGATTTGATGGTAGCGCTGCTGGTGTGCATGGTGAACATGTAGAATTGTATTCAGAAGAAGAATCATCGACTGGCGAAGAAGAGGAGGAAGAAGATGATGAGGAAGAGGAAGAGGAAGTGGCAGAACATGGTGATAACGAGACTGTTCAACATGGAGACGCCTTGGAAAACAGACCATCAACAGCAGGTTCTGACCGCACCTCAACTCCTCATGCCATGCAGTGGGCAATCCGTGCCAACGCACAGTCACGTGGACCAAGTAACAGCAGTCTGTCAGCTGCACAAACCACTGCAGGATCTGGATTTATCTATGTTGACTCGACATCACTGCGCAGTCGCACTGGCAACAATGCTGCTGCCGCTGGCACAGGGTCCAGTGATTTGCCATCGATTTCACAAAGTATGACAAGTTCTGCCAGTGCTTTAGCAAGAGCGTTTGGTATCGTCGTTAGGGAGGTTACCAATCTCCTCAATATTGCTCATAGCCCTTCAGACTTACCACCAGAGACTTTGACTCCAAGTTCGTCATCTTTAGGGGAGATTAGCAGTTTAGTGGACCAGCAGCTGCAAGTGTCCTGGAACTGGTTAGCCACAGTATTGGATTTCACTGAAGCTCAACTGAGATTTGGTTCCTCACTCTCCGCCAGAACTGACTCAAACCAGCCTAATTATCTTAAGCTGCATAGAGATCGGCGAAATCGCGAAGACCCTTTACTACTGAGAGCTTTAGAAAACAAACGGAAACGAACCGTGGTCAGGCGGAGACATGGCACCTCTAGTAGTAGTGTCGACACTGGAAGACAGGATTTCCTTGTTTATGTCATTTCTCTTTTGAGAGGCTTCTCAACTGAACATGGAGGCTCCTTGCCTCAAATGGATATATCTTCATTACCTCATGTGGCTTATGTGCTGGATGCGTTGGTTTATTACATCCGTAATAACCCCAATGCGAGCTCACAGAGCAAACGATCAAGTGTAGAAAAAGCAGTTGAAGTTACTGATGCAACTAATGATGACGAAGGCGGTGATGATGTTGACGACGAAGACAACGCTAATTTCAAACGCGAATCAGAGGAATGTGATGATGACACAGATCATGTTGATGAGGAACCTATGCCCACACCAAGCATTCCAGGGCACTTGCACAGTTTTTTCGTCCGAACTGACTCCACCACGGTACTAGGATGTACCCCTCCAGATCCATACTCGGCTCCTGTAGAAGAAGCACTGCCTCTGGCTTGCCAACCACACTTATTGAACCCAGCGGCACGCAGGGAGCAGATGTTTGGTACTGTTCAGGAGGAAGCTGACGGAAGCACAACTGGCACATCCCAAGTCAACACTATGGCGTTATTTTCTGCAGCGAGAGGTCACCTGGGACAGCAAGCAGCATCTAAAAGTGATTGTTTTGACGAAGCTCAAGCTGTAACCGTATCACCAACATCTTTTATTTGTAATCGAACGTCTGCAAACCTCATCTTGAGTCGCTGGCGTCTTTGTGTGGAGATGTTTGGTCAGGCCTTCCTTGAAAGCGTTGGATCTGAACCATCCTCCGTGCTGAATGAACTTGGCAGGTTTGATGTCAAGGAGACAAAATTTCGAAGGGAAATGGAGCGATTGAGAAACTCCACTCAAAGGGATTTAACTCTGGAGGTGGAACGTGATCGTTTAACATTGATACAACAAACTATACGTCAGCTCAATACTCAGTTTGGACGACGAGGTCCCAGGTCCCGCCCAATGACGATCCACAGAGTCAAGGTCACATTCAAGGATGAAGCTGGCGAGGGGACTGGAGTAGCAAGGAGCTTTTATACTGCTATCGGAGAGGCATTTTTGGCTGTAGAAAAATTACCTTCGCTCTTTACAAGTAAAAATCTTGTGCAGCGAATCCGACGAGCTGCGAGTTCCCGTTTCAAGCGCGACCGTGATGTGAGGCGACAGCTATCGGCTGATGCGCGCGCATTCCATTTTAGTGGAAACAACAGCAGCAACAACAGCAATGCCGCAGATGCAGAAGATGGTGATCGGCTGCCATATCACAGGCAGTCGTTAGGAGAACGACTCTATCCACGTGTGCATGCATTACAGCCTGCTCTCGCCAGCAAGATCACTGGCATGCTACTGGACCTATCGCCAGCACAGTTATTATTATTGTTAGCAAGTGAAGACACATTGAAGCAAAGAGTTGATGAAGCCGTGGAGCTTCTTTTGGTTTCTGGAAAGAAAGTCGGTAATGATAGCGAAGAAAATGCGTCGAGCTGTGGAATGGAGATTGACGACTCTGAGGATGACTCGTCACCATTGTTCTTCCAACCTGGCAAAATTGGTTTCTACTCCCCCCGACAAGGAAAAGGCTCAGATGAAAGGCTTAATTGTTTCAGGAATGTTGGCAGGATCATCGGTCTTTGCCTCCTGCAAAATGAACTGTGTCCAGTCAACCTCAACAGGCATGTCATCAAGTACATCTTATCCAGAAGGATTGGTTGGCACGACCTTGCATTTTTTGATCCTATGCTCTATGAAAGCCTGCGCAAGCTGATTGTTGAAGCCACATCGCTAAATGCTGAGGAAACATTTAGAGCTCTGGACTTAACATTTAGTGTCCAGATGACTGCAGAAGACAGCGATGGTCAGGTAGAGTTGGTTGAAGATGGAAAGAATGTTGCCGTGTGTCCTTCAAACGTCCATGATTATGTGCGCTTATATGCTGAGCAAAGGATGCTGGGTTCTAACACAAAAGCTCTTCAGTCTCTCCGCAGTGGTGTGCTGGATGTTGTACCGCAGTCAGCGTTCGACAATCTCACTGCTGAGGATTTTCGTCTTTTGTTGAATGGTTGTGGTAAAGTAAATGTTCAGCAGCTGATGAGTTACACATCGTTTAATGATGAAACGGGAGGAGCTGGAGCCGATAAACTGCTGAAGTTCAAGAAGTGGTTTTGGTCGATTGTGGAAAAAATGTCAAACACCGACAGACAAGACTTGGTGTACTTCTGGACATCAAGCCCTGCACTGCCAGCAAGTGAAGAAGGCTTTCAACCAAAGCCATCAGTTACTGTCAAACCAGCTCACGACCATCAGCTGCCAACAGCCAACACCTGCATATCTCGATTGTATATTCCATTGTATTCATCTCGCGGTATTCTAAAAAGCAAACTACTTCTTGCCATCAAGACAAAAACATTTGGATTCGTGTAG

Protein

XP_074606803.1

MPSIHIAVYPLPRTAEELHERLKEVSELKEKPSYLSSPILEALKGEVIKECVVGPRHVAFLLESGQVCRVPFTLHPDKLELTSRDSSTGEEENSNSAARSASHIVLHSGGGSRGQGENSWVLSNSGETLSGLTGHPVISRWGAAPSAMSLRTSSRTPVHGRGRVVRRGARGGTSGWGIGSRVVPATAVPEELVNQAQVVLQGKSRAAIIRELQRTNLDVNLAVNNLLSRDEDDGDDDENPEYLPGDDLMSLLDAGVHVDDPSFVVDPEAIFSEDMFYSSPYGSLHRRGNSSARASRTAVERETDRERERTREREALRRERDRWLGNIHTGSLDCVSSNNTSKQTVQDKSSAKSFSAEPVSVADLLQWWQPNLDGNFPCFIHIAAMYSELVCVGADGKLYQWKWEDPLPYQDQGNAVYHPRATALGLTDEKVVSLSASSIRASALTESGKVATWMDETLSSIASKLEHSAQGFTEFSGDKVVAVHTCSLYTCTQMSSGALYWWGILPFEQRKKLLEKARARARRNRTTFTSCIVKGVQVCLRSCPLYHAGSIGFNISSGVPRMGQLIESAWNLDEKCRFKVLPLGNEKTTFNPPPLEEHDADVPGSLGLKRKKDPSLEAADDKSIQDWDLKDVIFVEDKRNIPVGRVLKVDGPYAAVKFPPKESGPQGTAGSGVSGNDEATALLQDVRLLRKDELQLVKSSAANKIPDCIQRSPKLLYVPPGTRPVAVTVNCKGVHAILKTSLGVRYALYSLASSKPEAGGTMPKVCAAFLSQPASQDIKLYPTGDDSLVMMTDVNGALFPLAKNFLGTVKDPAWMDIPPLQSLGVGVTSLRPGTDCKSRALVVVLALQSQQLMPHVLKCDFDAIKHFLTSLEENPAQGKIILETALQERCDGNRNIIHACVSKSFPVSAHEPGETTDSQLNSGAGTNNGALGNKLESIKGAVDALAAAVAAAAAVVRSSDGAVASPGSGSRAGSGASPIGNGSADDSGSSRLGVCEMMQRAVTAARSSLLEVEDDAAIPTLHWPPDGPDQQDNETGPVLNPASTASPAATGESSASAAASAAAAATALSAPAVTSSPSTLTGSNQVTEQTQRSKALHCLNLLCESALLAPCLLQLMKAKDADGCTPFMAAVRGRSYHAGLTLFAKAQSLATNENGQLDKSTFMAMLYPTDSHPDASPLYMLCCNDTCSFTWTGTEHINQDIFECRTCGLTGSLCCCTECARVCHRGHDCKLKRTAPTAYCDCWEKCKCRALVPGSHLARIQLLKKLVSETDLVTKPNGRGEHLVLFLAQTVARQTVEQRQFRPLRTSAESRPKAKSKSLGASGTTPPLPDHDLSPPKFARRALEFILQEWRAVGAMMRDGYNPVTESSAGNLNSSHVTEQRSRLSSQPGTVRLDAFTHCLLAKCAPEILDPLLLTLRTAIENSPDPYKCEETTLALRFIRSVARVFVVLSSQMAPPNGKRKVGVVQPLMKCRRVFQSLSSLAIPELVKVADALLAPVRLGICLPAQPFSLLSSTLEATQSSEDLFTVEPLSMRTSTPSSVEEMPSQERPSVQRARNQRHRRRPVGSIPRAQGQNAAPVEGTGAEGEEVEVVEGGEMESESHEEAGDEEVESGAAGNESDMDLDLLAESESDSEESQVGEVPVVESVRRNRVPGSLIGFDGSAAGVHGEHVELYSEEESSTGEEEEEEDDEEEEEEVAEHGDNETVQHGDALENRPSTAGSDRTSTPHAMQWAIRANAQSRGPSNSSLSAAQTTAGSGFIYVDSTSLRSRTGNNAAAAGTGSSDLPSISQSMTSSASALARAFGIVVREVTNLLNIAHSPSDLPPETLTPSSSSLGEISSLVDQQLQVSWNWLATVLDFTEAQLRFGSSLSARTDSNQPNYLKLHRDRRNREDPLLLRALENKRKRTVVRRRHGTSSSSVDTGRQDFLVYVISLLRGFSTEHGGSLPQMDISSLPHVAYVLDALVYYIRNNPNASSQSKRSSVEKAVEVTDATNDDEGGDDVDDEDNANFKRESEECDDDTDHVDEEPMPTPSIPGHLHSFFVRTDSTTVLGCTPPDPYSAPVEEALPLACQPHLLNPAARREQMFGTVQEEADGSTTGTSQVNTMALFSAARGHLGQQAASKSDCFDEAQAVTVSPTSFICNRTSANLILSRWRLCVEMFGQAFLESVGSEPSSVLNELGRFDVKETKFRREMERLRNSTQRDLTLEVERDRLTLIQQTIRQLNTQFGRRGPRSRPMTIHRVKVTFKDEAGEGTGVARSFYTAIGEAFLAVEKLPSLFTSKNLVQRIRRAASSRFKRDRDVRRQLSADARAFHFSGNNSSNNSNAADAEDGDRLPYHRQSLGERLYPRVHALQPALASKITGMLLDLSPAQLLLLLASEDTLKQRVDEAVELLLVSGKKVGNDSEENASSCGMEIDDSEDDSSPLFFQPGKIGFYSPRQGKGSDERLNCFRNVGRIIGLCLLQNELCPVNLNRHVIKYILSRRIGWHDLAFFDPMLYESLRKLIVEATSLNAEETFRALDLTFSVQMTAEDSDGQVELVEDGKNVAVCPSNVHDYVRLYAEQRMLGSNTKALQSLRSGVLDVVPQSAFDNLTAEDFRLLLNGCGKVNVQQLMSYTSFNDETGGAGADKLLKFKKWFWSIVEKMSNTDRQDLVYFWTSSPALPASEEGFQPKPSVTVKPAHDHQLPTANTCISRLYIPLYSSRGILKSKLLLAIKTKTFGFV

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80TP3	E3 ubiquitin-protein ligase UBR5 OS=Mus musculus OX=10090 GN=Ubr5 PE=1 SV=2
O95071	E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens OX=9606 GN=UBR5 PE=1 SV=2
Q62671	E3 ubiquitin-protein ligase UBR5 OS=Rattus norvegicus OX=10116 GN=Ubr5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002381 (this species only)
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 activity\|UBR-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00658 all species →	PABP	Poly-adenylate binding protein, unique domain	Family	Interproscan
PF11547 all species →	E3_UbLigase_EDD	E3 ubiquitin ligase EDD	Domain	Interproscan
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR047503 all species →	Domain	E3 ubiquitin-protein ligase UBR5, UBR-box	Interproscan
IPR024725 all species →	Domain	E3 ubiquitin-protein ligase UBR5, ubiquitin-associated domain	Interproscan
IPR002004 all species →	Domain	Polyadenylate-binding protein/Hyperplastic disc protein	Interproscan
IPR003126 all species →	Domain	Zinc finger, UBR-type	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR036053 all species →	Homologous_superfamily	PABC (PABP) domain	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46276 all species →	E3 UBIQUITIN-PROTEIN LIGASE UBR5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0034450 all species →	Molecular Function	ubiquitin-ubiquitin ligase activity	Interproscan
GO:0090263 all species →	Biological Process	positive regulation of canonical Wnt signaling pathway	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10593	EDD1, UBR5; E3 ubiquitin-protein ligase EDD1	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.