Gene detail

Detailed information of XP_074606935.1 in Acropora palmata

Genomic Location: NC_133893.1:12656045...12693344
NR annotation: XP_029206250.2, myosin-IIIb-like [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074606935.1

ATGGCGGACGCGGGAGGTCACGCGGGCGACAATATAGCTTTGTTAGACTTAAAAGATATCGAAGAAGGAACAGTTATAGAACTTCTAAGAAGAAGATTCTCCCAAGGCGTGATTTACACGGCCATTGGAGAAATTTTAGTTTCAGTGAATCCTTTCAAGCAACTTTCGATATATGGACCTGAGTTGATGCAAGCTTACCGAAAGTCAAAAGCAGATAGTCAAATGGCGCCTCATGTGTATCGCAAGTGCCAAGATATCCTCAGATCAGTGCACTTCTCGTCAAAGAATCAGTGTTGTGTGTTAACAGGCGATAGTGCATCGGGAAAAACAGAGTGTCTAAAACATATTCTGCAGTACATTGTGAACGTTTCTCCACTCTCACATGCCGGCCTCAAGCGGAGGTTTTCGCAGGTCCAGTTTATCCTGGAGGCATTTGGAAATGCAGTTACGCTTAATAACACTAACTCCAGCCGTTTCACATCGTACTGGGAGCTGTACTTTTCACCTCAGGGCAAATTATCTGGAGGAAGAGTGCATCTCTACATGCTGGAGAAATCGAGGATAATTCGTCCGCTTAAGGGCGGTAAAAATTTCCATGTGTTTCACTATCTTCTCTATGGAATGGACGCTGATCAGTTGATGGAATATAATCTAACAAGTGAATATTCTCACAGGTATCTAAGTTATGATCCCTCTGTTCCCACTGAGGACAAAGCAAGCAAACAATTGAAGAGTGAAAAATATGCGCTGCTTATCAGTTACATGGAAGCAGTGGGGTTCTCCGCTGAGGATATCAGGAACACTCTGAATTGCTTAGCTTCGGTTCTTCACATTGGAAACGTTGCATTTGCTTCCCTGAACTCACAAAATAATGCCTCCATGGTGCAAGACCCAAGTCCTGTTAATTGTGCGGCCTTTCTCCTTGGTGTATCTGCTGACGAACTGGGGACAGCCTTAATCTGTGGGGCAGTGTATCACAAAGGGGAAAGAGCAACGGTTAGAAAGAACACGGATGCTGCTGCCCAAGGGCGTGATAACTTAGCCACAGCTCTTTACAGCAGATTATTTAGTTGGATTATATGGAAGGTGAACAGCTTCTTGGAGGAAAACACCAAGGAATTCAACAGGCATCGTTTTGGCCCAGTGCTTGGGCTACTTGATGTATTTGGATCTGAGAGACTTGAAATAAACCTTCTTGAACAGTTGTGTATCAACACAGCAAACGAACAATTGGCTCACTTCTACAGCCAGCGAATCTTTGCATGGGAGCAGGCAGAGCTTGAATCTGAAGGCATTCGCAGCTACGAGGTGCCCTTCCGTGAAAACAAAGGGACTGTGGAGCTGCTATTAAATTCCCCTAATGGAGTCATATCACTGCTCGATCAAGAGTGTAAGATTGTTCAAAACACTGATGCTGCATTTGTCAAGAAATGTGATTCCTCGCATCGGAAACATCCGAACTATGATTTAGCAAAACTGTCTTATCCTGCATTTACAATTCGACACTTCTCAGGTCAGGTGACATACGTGGCTCTTGGATTTCTCGGTAGTAACAGGATTATGTTGGGCACCTGTCTTTCAGAATGCATGCGAGGCAGTGAGAATCAATTCATCAGGGCTTTGTTTAAATCTCCCATCTCTGAGACAGGCTCCCTTGCACTGCTTCCAGAAAGGATGAAAAAGGCGAGTTTTTCCATGCAAAAGGGTAAACTGAAAAGGAATCCAACAATTAGACATAAAGTTGCAGTCGTAAAGCATTTGGTTGGAAAGGAGAATCATCGTCCAACCAGGACCCCTTTCCCAACAACCGGATCTCAGCTTAGGGCATCGATTTCTGAATTAATGGAGAAAATTGTGCCTTGCGATGTACACTTTGTGAGATGCATCAAGCCAAATGGGAATCAGTCACCTGGTCAGTTTGACATGGAATTAGTTCTCAGTCAAGTGAGGTCACTAGCTATAGTTGAGACAGCACGCTCAAGATCGCTTGGGTACCCTCTGTGGCTTACATTTGAGGCATTCGTTGAAAGATATGGGATCATCGTTGGACTGCATCGGTTTGTACACACCCGTAACACTATGCAGCAGCAATGTTTAAAGATTCTTCACCGAATAGATTTTCCCGGAGGCTGGAGGATGGGCAACACAAAGGTGTTTCTAACTCACCGGTGCCACGAAGCGTTAAATTCATTCCTAGATCGAATGGTGCAATTTGCGATAGTGATACAAAAAGCTGTTAGAAAATGGCAGGCCAGAGTTCTTTATTCGAGGCTTAAAAGTCTGCAAGTGAAACAATCAAACGCTGTTACAAATTTTCTTAACAGGGTTGGCCAACGAAGTGAGATGTTGTTTGAACATATTTCTAACCAAGTGATGGAAGAAACTGCCAAACAAAGGCAAAGAGAAAACGAGGTCAATCAACTAAAGAGCCCAAGGCTATCGGATCCAAACAGTCCATCTACACCTTCACAGAACACAGATGTACCAGATGGATTTCCTTCTTTATCTCCTCGTCAATCATTCTCGCAGCAAAGGACATCATCATCTGCCAGTTCGATCACAGATGCATTTAGCCCAGGGGCAACACCAACCCGTCCGGGTGGCATACAGTCGAGAACATCTGACCTGTCTGTGACTTCAGTGGACTCCGTTTTCTCACCTGACGTCGATGACAATGAAACTGCGGCACCTCAAGTTTGGGCCAAGGTTACGTGTTTTGAAAAAGAGCATCCGAAGCGGGAATTCAATGTTGATCGACCATCAATTATTATCGATGGCTCGGAAAATTCTTTTGACGCCACAAGAATTGGGTTGGGTACCCTACCACCAAGTTCTGACGCAAAGGTCACAAAAGTGAGAAAATGCATTGGGAAGGGAGTCGAGATTGTAAATGACGAACAGGGAGATGTCTGGGCAACTCGCGGCAGCAAGAATGCAATTTTCGTAAAGGGTCAATTTTTATCCAATGAGTTGATCGCGTCAAGAGGCGCTTTAGAAAGAGATGCAACGTCCAAGATATTTGCTTGGGAATCGTTTGCTGACTCTGTCCGTTACCACTGCCTCCAGTCCAAGAAATTTAATCCGAAAATAGAGGAAGTCATCATGTCCAGCGCTTCCATCTATTTCAGCTTTGTAAAAGATGGCGATGATGACGCAAGCACACCTTGTTGGGTACAGCTTGATGTTGTCCCAGCTTTACAACAGGCAAAAGCTGCGTGTGATTACGCTCGCGAGAAACGAAATCAAGAGAAACAACAGGTGATCAATTCTCTGCCGCCCATTCTTCGCCCTAAAACAAGGAAAGCACGCGAACTTGCTGCTATAGAACATTTTCAGCAGAAAATCCGACCGCGACGTTACATTGCGACTGTGAAGTTCAAGAGAAAGAAATGGGCGCGAAAAGAAGCAGTTTTGAATCCATTTTTGTTTGGAAATACAAAGAGCTTGTCGCAGACAGATCAACAGGAACCAGGACCGAGTAGCAGCGAGCCAATGGATTCTTTGGATGCTGCGAGTTACGGCCCTGAGGCGCTGATGGATGCGTTTGGTAGCAGTCCGAATGCGAGAGAAAAAGAAGAAGGAACCTCGCCTCAAACGATTGAGCTGCAGTTTCAAGGGCGTAAGTCAGTGTTGTCACCGACATCATCGAAAGAAAAACCAGGGAAGAAAGTTTGGGCAAGGAAGAAGTTTGAAGATCGCAAATCTGAAAAAGGCGGGAAGCGATCTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WXR4	Myosin-IIIb OS=Homo sapiens OX=9606 GN=MYO3B PE=1 SV=4
Q1EG27	Myosin-IIIb OS=Mus musculus OX=10090 GN=Myo3b PE=1 SV=2
Q8NEV4	Myosin-IIIa OS=Homo sapiens OX=9606 GN=MYO3A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000789 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03166 all species →	MH2	MH2 domain	Family	Interproscan
PF00063 all species →	Myosin_head	Myosin head (motor domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001132 all species →	Domain	SMAD domain, Dwarfin-type	Interproscan
IPR001609 all species →	Domain	Myosin head, motor domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052409 all species →	Family	Myosin-III family with kinase activity	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR017855 all species →	Homologous_superfamily	SMAD-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46256 all species →	AGAP011099-PA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003774 all species →	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016459 all species →	Cellular Component	myosin complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000146 all species →	Molecular Function	microfilament motor activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0030832 all species →	Biological Process	regulation of actin filament length	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08834	MYO3, DFNB30; myosin III	EC:2.7.11.1	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.