Gene detail

Detailed information of XP_074607528.1 in Acropora palmata

Genomic Location: NC_133893.1:5030944...5044258
NR annotation: XP_029200334.2, neoverrucotoxin subunit alpha-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074607528.1

ATGTCCTCGCAGAACGATACAATTCAGGCTCTTGGTAGTCCATTTGACCTTGGTATGCTTTATGATCGTCGTTCAGAAAAACTGGTCCTTGGGAAAACATTGTGGTCTCCAAATCACCTGAGTCAGGCGGTTAACACGATAGCAAGACCATATACCCACTCAGAAGTCCTTGCCGAAGACACAATTGACGATAAAGTAAATGCTCTAAATATTAAAGCGAGCCTTAAACTGAGTTTCCTTGGAGGATTAGTCAGTGTACAAGGAGCGGCTAAATACTTAGATGATAGAAGGGAATCGACTAAGGATTCTCGCGTGGTGCTGAAGTACGAGACAACAACTGAGTTAAAACAGCTGACCATGGAACATCTGGCACAAGGAAAGATGCAGTATCCAGAGGTGTTTGACCACGATATTGCCACTCATGTAGTGGTTGGAATCCTGTATGGTGCAAACGCATTCTTGATCTTTGACCAGGAAGTTTCCGAAGATGAATCTTTGAGAGATGTACATGGTAATATGGAAGTACTGGTAAAGGCCCTGCGTACTATCCGTGTGGACGGAGACGGGACTGTCGATATAAAGGAAGACCAGAGGAAGAAAACAGAGAAAATGTACTGCAAGATGTATGGAGATTTCAGAACAGAAGAAAGTCCAACTACTTACGAAGAAGCAGTAAGGATCTACAAACAGCTGCCATTATTGATTGGGGACAAGGGTCAAAATGCAGTTGCTGTCCAAGTATATTTGTATCCGCTAAGTGAAATCAATAGCAAGGGGCAACGAATGGTTAGAGAAATCAGTGCCAGTTACATAAGCAAGACATGTGAGATTCAAGAGCATATACAGTGTATCGAGGCTCAATGCAGCAATCTAATGAGAGAGGATGTTTGTTCATTGTTTCCTAGAGTGAAGAAGCAATTATCCCTTTTTAAAAGCAATATCTCCCGATACAAGACCTTTTTCCAGAATAAGTTGCTGCCTTTGCTTCCAAGCATTAGAGGAGGTGGAGCAGAAGAATCAACGCTCGGAGATATCTTTGAAGAAAAGGAGCGTTCTCCCTTCGCACAAACTTGCATGGATGCTTGGATCGAGGAAAAAAGGAAAGAGATAAAGAAATTGCAAGGCATGGTGAGTTTCTTGGGAAACACTCCTTTCGTTAATCCTGAGGATGTAGAAAACGAGGCGTTCGACCCAAGAAATGAGAAGATTGTGTGCTGTACATTTACGATTGGCGAGGAAAACGATCATCAGATTCTGAGCATGGATGGGTACCTTACTGGAAAAGTTCTGCCGCAGTTGAATAGAGAGGCATCAACGGGTATTGATGACAAAAATTTCAATAAAAGAATGCGTCAAACACTGAAACAGTTCGCAGAACTCAAAGCTGCAAATGAAAACCACAAGGAAGTGAAATTTTTCGCTACGGAGAAAAGTCTTTCTGACACTTTCAGTGAAAACCCAGGAGCCTTCATCTATCTGTACGAGGATGGCGCTCTAGATAATGAAGATTTTAAGTCATCACCAAAGCCAGAGAAACTAGAAGCAGAGAACGTGCGAGATGTTTCTATCGAGCTTCGGTGGATTGATCCGCACTTTAGCAAGAACAAAATCAAAAGGTACAAAATTCAGTACAAAAAGGATGAAGATGCCAGCCTCGACTGGATCACTGAGTACTCAGTGTGTGGTAACAGAGCTAAGCAAACGGCTACCATATCTGGACTTGACCCCGCTACCAGGTACTTGTTCCGAGTATGCGCAGTGAGACAGATTGTGGTCAGCCAATACAGTGATACTTTGTCGGAAACTACCAAACCGACAAGTCCGCCTGGCAAGCTACCCTTTGAAGCCGCGACGCCTGACGCAATTGCTATTGGATTTGCGAATCCCAAAACTATTGGAGAGGGAGATAAGATTGAAAAATACGAGGTTAAATTGAGCGCCAATTCCCAACATATGGTGCAAGTCCTGCAGTGCACAGAAGATGCGCCTCTCACTTGCGCAATCGAAGGTCTTCAAGCAGGAGTACGTTACGAATTTAGAGTTACCGCGATGGGTTGCAGAGAAGGAGACAGAGACAGCGTGCAAAGTGACCGTACCGATCCATTGCAAACCACGCTACCTCCGAAAAGAATTGACACCCGCAGGATTCTTATCCATTGCAAACTTGTTCAGTCACCAGAAGATGGAACACCAGCAGTATACATTCTTCCTCTAACTCTCGCGTACCAAGACAGCCGCTGTCAACTGCAAAAGTATGTCATTACTCTTGCTGAAAAAGAGACGCAGATGCCTGGTAAATGTGCTTCCGTTCCTGAGAAAGTATTGATGGTTATTGGGTCAACGGGCTCTGGAAAGATAACCACAGTTAAGGACGGTGCCTACTAA

Transcript

Protein

Uniprot

Uniprot term	Description
A0A2P1BRQ0	Cytolytic toxin-alpha OS=Scorpaena plumieri OX=274700 PE=1 SV=1
A0ZSK3	Neoverrucotoxin subunit alpha OS=Synanceia verrucosa OX=51996 PE=1 SV=1
Q98993	Verrucotoxin subunit beta OS=Synanceia verrucosa OX=51996 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF18078	Thioredoxin_11	Thioredoxin-like SNTX domain	Domain	Interproscan
PF21109	Stonustoxin_helical	Stonustoxin helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR052090	Family	Cytolytic pore-forming toxin	Interproscan
IPR040581	Domain	SNTX, thioredoxin-like domain	Interproscan
IPR048997	Domain	Stonustoxin-like, helical domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31594	AIG1-TYPE G DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan