Detailed information of XP_074607698.1 in Acropora palmata

Genomic Location: NC_133893.1:13398297...13418891
NR annotation: XP_029181368.2, death-inducer obliterator 1-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q92576PHD finger protein 3 OS=Homo sapiens OX=9606 GN=PHF3 PE=1 SV=3
Q9BTC0Death-inducer obliterator 1 OS=Homo sapiens OX=9606 GN=DIDO1 PE=1 SV=5
Q8C9B9Death-inducer obliterator 1 OS=Mus musculus OX=10090 GN=Dido1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003690 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07744
all species →
SPOCSPOC domainDomainInterproscan
PF00628
all species →
PHDPHD-fingerDomainInterproscan
PF07500
all species →
TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan
PF07533
all species →
BRKBRK domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003618
all species →
DomainTranscription elongation factor S-II, central domainInterproscan
IPR012921
all species →
DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR036575
all species →
Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR037259
all species →
Homologous_superfamilyBRK domain superfamilyInterproscan
IPR006576
all species →
DomainBRK domainInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786
all species →
Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11477
all species →
TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074607698.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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