Gene detail

Detailed information of XP_074610408.1 in Acropora palmata

Genomic Location: NC_133883.1:25531607...25542690
NR annotation: XP_029197139.2, HEAT repeat-containing protein 4-like isoform X1 [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074610408.1

ATGATACTTTCTTCACAAAGCAAACAACTTCCAAAAGATGAACCATTAGCCAAACTCTCAGAATTGTTTTCTCAATATCAACCTCTTGCTGACAGGAGAGCTAAGAAAGTCAGTCGTTCATACCTTAAGAAAATAAGTTCTGGTCTTATGTTCGATGATATGGTGTTACAAGATCGTGCTCCTCATACTCTGCCTTATAATGAGAATGATGTACACGCTGTCTTCAAAAGTGGGGGAATATGCAATTCCAAGACACAAGTTATAGGACTCGGTGGTCGCCATGATCCAAGGGGAGTAGTCAAAAGACATGCTCTCTGTCACCTCAAAGGACCCACAAAACTTAAACCCCTAAGAAGGAAATTAAAGACATCACCAGCTAGAGCAGATACTGGGAAATTAGTTTCAACAACAAAGTTGAAAGGAACCCACTCTTCTCTTGGTTTGACTTTGGCAAAAGGTTCAGAAAGGCATGAATGGGATGAATATGTACTTGCCTCTCTCAGTCAATCCACAGCTAAATTGATTATAAAGGAACAGCCATCTGGAAGTGACAAGGAAAGACTAACTAGTTTTCTGGAAAAGAGGATCAGAGAAAGCCAAGGGAAGACAGCTGATGGAGGACTTTCTGATGGTGCAACAGAGGAGATGAAGACTTCAGCTATTAAGAAAAAGGCTAAAGATGTTAAAAACAGGGAATCAAAGAATACTTTGGAAATCCATTATTCACCCTCATTTGCATTATCTCCAGCAGTTGGGGATAAGAAACTTGAAACAGATAACATTTTCCAACAGGAATTACTTGGAGGTGCACAACCAGTGCCTTCCAAGAAGCCCTCAGAGTCAAGTTACATCATTCTGGACACAAATGATAAACTCAAGTTTCAAAGGCAGTTACAAGAGAACTATCCTCAAGGTTCAGAGGTCTGGTACTCTAAAAAAAGAATGCCTTTAAAAAAGGCAACAGAGAAACCACAAAGGAAGCCAAGCAAGTTAGTGAAAGGTTTGCAACGGTGGAAAGAATTGCCAGTTGTCGTGCAGGACGATTATTATACTCCTGTTGTGAAAGAATCAGATATTGATGTCGAGACATTTAGCACTGCTTACAAAGAAAAGAAAAAGATGAGAGAGGATTCGACTGTTGTAAAAATTGTGGAAGAATGGAGATCCAAGTGGTTTCTTGAGAGCCATTGGCAAAGATGTGGAACAGAAGAATTAATCACAGCCATGGGTGACATCAATGATCATATCAGACTATCTGCTGTATCAGCTTGTAGCAAAGCAGCTGAACTTCGACATACCAAGAAGCAGGAACATCATTTAGGGATACTGTTGGATAAGCCTAAGGTACCAAGCGAATCCCTTGAAGCACATGTAGAACCCGAATTAATTTCTGCCGTGACAAAACTATTGGATGACAGGAATCCTCAAGTCAGAGTTGCTGCTGCCATAACACTGTATTCACTCAAGAAGCACAATGACAATGCCAAGTCCATCCTCTTGTGGGCAATGGAGTATGGTGGACCTCCCGAGAAGTGGGCGGCAACTCAGTGTCTTGCTCTGAGCGGTGTCGTCACTGACAAAATCATCGTTGAGCTTATTAGTCAGTTACATGCAGATAATGCTGTGAGAACAGAGAAAGCTGGCAATCTATTGGCACAGCTCAGCCAACAGTCGGATGTTGTTCAGACGTTAATTGCAGAACTGTTGAATAGCAACAGCTGGAAAGACCGCCTGACAGCTTGTAAGGTGATTCCAAAGCTGAGGGGAGGTCCCAACAAGGACATGGCTCAAAAGTTATCTTACCTGATGTGGAATGACTGGAACAAAGATGTCCGGTCAACAGCAGCACAGGCTCTCGGGAAGACCGGAAATGGAAAGCTTGTTCATGATGCATTGCGAGAGAGAATGCTGACTGGAAACGACAGGATCAAAGTGGATGCACTTAAGAAACTATCTAATCTGGGTATCATGACAGCTCGTCTTTTGCCAGCTTTGCAGGAATGTTTTAGGAGTGAATACGTATCTGTCAGAATCGAGGCTGCTATGGTTGCAGGGAAGCTAAAGATTTCAGACCAGGGTGTGCTGAATTCCCTACAGCGTTTAGCTAGTGAAGACGATAGCTGGAAAGTGAAAGCACACACCATTAAAGCTCTTGGCGCGATAGGAGTGGTCGACGAGAAGTTGATTGACGTTATATTGTGGTCCATTCGCTATGAGAGGGTACCGGCTGTACGGGCTGAAGCTTGTAACGCAGTCGCGGCGTTGGGTTTGCGTGATGAGCGGTTACTAAGCGTTTTGCAGGATCGACTGGTCGTGGAAACTGAGGACATTGTGAAAAGGGAGGCAATTATGACCTTGGAATCACTAGGTGTCGAGCCGACTGGCGACAAGGAAATGATCGAGGCCATAAGACAGGAAGTTAAAAGACTGTGCAAAAGAGACGTCATTGTGGCGCACATCCTGGAGGCCGATCAGGAGGCAGAATACAAGAGTGACTACAAACGGCTCTTAATGCCCGAGACTGAAGAACACCCCTCCTTGTGCGTTGCATCGCGAACCACAAAACTGAGTTCAAGAGCCGTTTCGCGCGCAACAAGCGATTCGTCGCGAGGATTCGATCCCATACTTGCGGGCTATCACACGCGAGAAAGGATGTCCAGAGCACCCACACCCGGTGAGCTCGTAATGAAACGGTCGCTTCTTCCATTGGATTTGAACAGTACTTCTTCGGAGAATAGTGAGCGGATGAGCGTGGAAAAATGGGACGACTTGTCCAATGACTCTGATATTGATGAGGGGTCTGGGAATGAATTAGGCCCCAATGGCGTGCTTACAGAGGCAGAGAAGCTGGAGGAAAATGGTGATTTGGACAAGAAAAGACAATCAGCTTCAAGTGAGATTTCTGCACCTCAACTAAGGAAAAACGACATTTCAGAAGACCAGAAAGTTACGCTTCCTTCTGGCGATGCAGGAGAAAAGAATTGTCAAAATTCACAGATATCGTCCGAATTGGAATTCGACAAGGATTACACTGAGCTTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86WZ0	HEAT repeat-containing protein 4 OS=Homo sapiens OX=9606 GN=HEATR4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005309 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02985 all species →	HEAT	HEAT repeat	Repeat	Interproscan
PF13646 all species →	HEAT_2	HEAT repeats	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000357 all species →	Repeat	HEAT repeat	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12697 all species →	PBS LYASE HEAT-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24813	HEATR4; HEAT repeat-containing protein 4	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.