Detailed information of XP_074611247.1 in Acropora palmata

Genomic Location: NC_133895.1:1486455...1495810
NR annotation: XP_044169166.1, DNA mismatch repair protein MutS-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2WAN4DNA mismatch repair protein MutS OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=mutS PE=3 SV=2
Q3YSJ8DNA mismatch repair protein MutS OS=Ehrlichia canis (strain Jake) OX=269484 GN=mutS PE=3 SV=1
C0R5H4DNA mismatch repair protein MutS OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) OX=66084 GN=mutS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005817 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01624
all species →
MutS_IMutS domain IDomainInterproscan
PF05188
all species →
MutS_IIMutS domain IIDomainInterproscan
PF05192
all species →
MutS_IIIMutS domain IIIDomainInterproscan
PF05190
all species →
MutS_IVMutS family domain IVDomainInterproscan
PF00488
all species →
MutS_VMutS domain VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007695
all species →
DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR007860
all species →
DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR017261
all species →
FamilyDNA mismatch repair protein MutS/MSHInterproscan
IPR007696
all species →
DomainDNA mismatch repair protein MutS, coreInterproscan
IPR007861
all species →
DomainDNA mismatch repair protein MutS, clampInterproscan
IPR036678
all species →
Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR016151
all species →
Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR000432
all species →
DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045076
all species →
FamilyDNA mismatch repair MutS familyInterproscan
IPR036187
all species →
Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361
all species →
DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0006298
all species →
Biological Processmismatch repairInterproscan
GO:0030983
all species →
Molecular Functionmismatched DNA bindingInterproscan
GO:0003690
all species →
Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0043504
all species →
Biological Processmitochondrial DNA repairInterproscan
GO:0140664
all species →
Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074611247.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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