Gene detail

Detailed information of XP_074613351.1 in Acropora palmata

Genomic Location: NC_133883.1:6533370...6560855
NR annotation: XP_029193869.2, nuclear pore complex protein Nup205-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074613351.1

ATGGCGGCTGCTAGAGAAGGAATGTGGAGGCCCTACAAAGAGCTTCAGGCAACTGTAGAACGATCTCTTTTCAAGAAAAGGCCGGAAGTGTACCACGAGTTAGAAGTAGCGTTGAAGAAATTTAAACCCGATTTAACCTCTTTGCTGAAAAATCCCCCAAAAAATGTCGATCACAGAGATAAGCTAAAGAGAGCACCAACCAATGGCCTTCAACTTACAGCTCATGCAGAAAAACAAAATCTCCCAGAGCAGTTTGTTCAGGAAGTCTTGATTCTCAGTGACGTTCTTGATCTGAATGAATTTGTGTGCACTGATTTGCTTCTTGCTGGCGAACAACAGCAGCCTAATTTTCCTGGTTTGACCAGAGGCTTGGTAGCTGTACTTCTCTATCATGATGGGCGCAGGTGTCTTGTCAGTGCATTGAAAATATTGATCCAGTCCCGTGAAGGAATCACATGGACAATGGGACTCAATGAGGACTTGTCTCAGCTAGCAACGAAGTTTACAGATGAGCTCTTGCAAGAAGGGTTAATAACGACGATTCTTGAACAACTCCAAGAGCTTGATGTTCAAAAGGAACTTGACAAACTTGAGCGAGGACAGGGAATTGGAGATGAGCATCATAAGCAACAACTCATTGACTTCATCACAGATCAAAGACAACTTTTGGCTGAGTGTCTGTACTGTTTTGCTTGTCAAGCACCTCTTCCAAAGAGGGAAGCCCTGCAACTCTTGTCAGCTCTGAAGAAGTGTCCCTCCATTGATGCTGATGGCACCTTAGATAGCGTCACTCTCACGTTGCTAATGGCCATGTTGTATTGTTTAAATGTTGATCCCCTTGATGAAGCAGCAGAAATTCAGTCTTCCATCAGAGAAGAAACTTTTCCCTTGTTATCAGACCACCGCTTCATTCCAGAGTTTCATCTTGAAATTAGTGAACAAGAGTCCTGGCAAAATCAGGGAATGTGTTCTTGTATACAGTTTGCCTGGGCATTAGTTCTAAGATCTTGTAGCCATTGGCCAAATCTTGTCGGAGCAGTTGACGTTTTAGAGGAAGATGAATGTGTTTTAGATTTGGCTGTGGATGGGTGTGTCTTTGGTTTCCTTCGCAACTGTGTGGTAAGAGCATCCACATTTCACCAAGAGGAGTACTTTGTACAAAGATTACATTCCCTTGTGACAGGATTTATTGTCAAGATGCCACTGAAGGTCAAGGAACTTCGCAACCAGGGTGATGAAGCTGCACGCATCATTCAAGCACACTTGCAAGATGGTGTTGAGCCTCCAGTTGGTTTGTCCAAACATTTTGAAGACTTCATGAAAATGATGGGAGACCTGTATGAAAAGGATCCTTGTGGTCTGGAACTTGCTGCAGATTTCTGGTGTCCAACAGATACAGGTTTAGGCACTTCTTTCTCACCTTACAGCACAGGGATGTCTTCTGCATTGCGGCAACGTGCATCTCAAAAGCAAGTAAGCCTCAACAAGTTTCTACGTTTGGCTGGTGATCTGTTGCCACCCCCACTGTTTGTTCCATATTTAGACATGTTGACAGGACTTGCTAATAGTCCTGAAGCTGCCCACCATTGCTTCAATCTCCTCAAATCTTCAGCTAATGGTCCTGTGTCCTGGGATCACTTCTTTGGCTCCTTGAAACAGTATTACATGGATTTGAGACAGGATAGCGGCCGTTCAGTGATGATGTATGGAAGTCTAACAAGGGAGACTAGTCTTAGTCATAGGCCAGACATGTCAAACTACAATATTACACCAGAGGAGTTAGAGGGGCTGGAGGCAGTACTGAGTTTAACTGAGAGAGTGGCTGACAAAGATGAAATAGCTCGCTTAGCTATGTGTGAAAGTCAAGCCTGGCTACCCATTGCATCCTTGTTTGGTTTGCTTGGGTGTTCTGTGCCAGTGAAGCTGAAAGCACAGATTCTTACAACCCTGGCTGCATTTGCAAAGTCTCCTGAAATAGCTTCTTCAATGTGGTTCACCTTGGAACAATCACAGATTCTTCAAACTATAACTCCAACAGGCCAAGCTGTGCAGCCGGGAGGAATACAGGTTGAATTGAATGAACTTGAGGCACGCGATGAAACATACCCTGAAACACGAGCATTTCTTAAGCTGCTGAATAATCTGACAGATATTCCCCTTTCTTCTGCCCTGGGATCAGGTTATCGTGTGCCAGGCTTTGAACCATACCTGACATTCTTAAGGGATGACGTCTTTCTAAAGTTTAGTTCAAGAGGATACCAAAACCCTAATGAAAAGTGGATTGTTGCAAGTGATGTCCTTCAGATCTTCTTCAAGTTGCTTGATGGTTACACCCCTAAACCTGAAGATTTTGTTGACCAATTTGTTGAACTCCAGGGTGGGGATAGAATTGTTGTCCCCAAACCTCCTGGATTGAACCTCATGGTCCACATGCTTAATGATACGCCAACATTAAGAATGCTACTGAGTGTCATTGACGGGGCTTCAACTTCTCTGGATCATCTAACTTTCAACTCAGAGGGGAAAAAGGAACTGGAAAAAGCTGCTTTACTTTGCTTGAGAATGATCGAAACGGCTCTGGAAAAGCAAGAGCAATTTGCGAACACACTTCGCAGCGTCACACAACAGTCTGCCATCATGGTGTCACGTTTAGAGGACCTGCTTCTGAGCATCAACCCACGAACAAGTGCCGCTGATTACTTACTGAAGATAATGAGATATCTTTGCCATCTTCACACTGGTGCAGATCTGAGCCTGTCAGTGGTGAAAATCTTGTGTTTGGTTTGTCAATCCACTCAAGTACAGCGCCATCTAATCAGTATTTGTATGAGCAATCAGTCTTTGTCGAAGAAAATCTTAATAGGATTTGTGGATCATTTGGAAATCAATGAACCCGAAGATCTTCATGAAAGAGACGAACTTGGAAAAGATTTCGTTGACGAAACGTCCCATAGTGTGTCGCAGATTCGTAATGCAGTCAGACAGAATATTCTGCGGCTAATTCTTCATTCTCTCCAGCTCCCTCCGCCCAATCTCGCTCATTTTCTTTTGGGTTATGAACTTAGAAAGCCTGTGGCAAAGACCAACCTACAGGATCCTGGGGTTCAAGGGGCCTCAAAGACCTGTCTGCACGCAGTCCTAGACATGTTAAACAAACGAGTAGATACACATCAGGGACCCTCTTGTGTGACAGAAACTCCCAAGTTTGCTGAGCTTGCTTATCAACTTATCTACAGTTTGTGCGCCAATAAGGACACTGCAACCCCAACGCTCCGCTACTTGAGAACCAGCCACGATTTCTTGTACCAACACCTTCAGCATTTGCCTTTCAAGAAACTTGTCAGCATTGGCTCAGATGGTGAACAGCCCACCTTACCGATGCAAACCATTGCCAGCCAGCAATCCTGGCTGCTGAAGACGGCGGCAATTGAACTGCGAATGACAGCGCAGGGACGTCAGAGGTCACACGCGCAGAGACTTCTGGGGCTCTTGATGGGAGAACATTCTGCACTGCGCCCGAACTTGGGAACATCGCAGTTCCAAGAAATGGTTCCACGACGTCTTGAAGATGATTTCACATCTGCTGATACCAGCCAGGCGGCTTACGCTGACATGGGGCAGTCGCAGACGCGGCGCAAGCTTCTAGCCATCTTGGAGTCTGTAGATTTTACACAAGATGTTCCCCCAGCATTGCAGCTGAATTATTTTGACGCGGGTGTAACCGAGGAGGCCATCGCCTCTTGTGAACAGAAGGCCGAGGATATCGACGTGATGTTTTGTAACGTTCCAGTTCTTCACAAATTGTTGATGACTGAAATAACTGGGGTGCAAGGGACTGCAACGGCTGGTCAGAGAAACTTTTGGATTCAGGAAGTCCGAGACATCCTTCAAAATGTTGTTCTTCGTAACATGATGCGAGAGAGCTTGCACATCAAAAAGGAAGCATTTGAGGCTTGGAGACGTGTGATTGAAGTGGCTTTGGCATCGTGTCCTGCTGATATTTTCCCAAGAGAGACACGGCAAACCGTTATATCAGAGATACTGCAGGATCTGCTTTGCAGGATTGCAGATGAGAGTGCAATAGCAGAACTGACGTCACCAGTATCCGGAGTCATCTTATGCCTCATGGCACACCTCCGACAGTGCACCATTTCCTTGAACTCCTCGACCACACCCATCTCTATACCGGAGAGCTTTGGAGGGAGTAAATCCCTGCAACAATCTGGTTCCTCTCTCCCTGTTGGTGCGTCAGTGGCCATTCTAAAGGGGCTAATTGAAACTGTCCTGCGATCTGGAGGGGGTCTGCAGAGAGTTCGAGCCAACTTGTACGCTGCTCTGATGTACTTCATGCAGACGGCGCCGGAAACCCAAGAAACGAAGGAGAAAGGTGTTATGGAAAACGTACTTTCCCTGTACCCTGGCCAGTCATGGGACACCAGTATTCTGCCAGTGTTGTCGAGCTATGGAGAACCTTTCATGGATGCTGTCTCCAGGGACTCCTGTGATGGTCATGATGTGGGGCGAATGCTAGCGTTTTCTCTTCTGGATGCAATCATTGCCGTTGATTGGCAGCAGCGCTGGTTAAACTATCTCAGCATAAAAGGGTACCTCAGGCACATGACTGAGGCGCTGCCACACGAGGACCACATTTTGCAATCCATGTTGGACCCTTCACCTGAGCCCCTCAAGGCATTGTACATCTATGAGTCCAAGATGGCGTTATTCGCCCGTATTGCTCAGTCATTTGAAGGCGCCAAAGTGCTTCTTCAAGCAGGGCTGCTATCGCGCTTGGCAGAATGTAGTTTTCTTGATCAGAGACCAGAACAGGAAAGGATTGGTCTCTCTGGTAGCCTGTATGCTTATGACCAAAATATGAGTGAAGTTACGCAGGATTCGTTTGTTCCATCAGTGATGGAGAGATACAGGCAGCTGCTAATGCCTGCTCTCAAAGTCATTCTTGCGATACTGACATCTTTGGAATCTCAACACGAGGAAGCATCCATCAAGGCGCTGCACTTTGTTGTATCCCACATTGACGTTTTTGTAAGCATTCTTCAAGACCGACAAGCCGTGCACACATCCGGATCACTGCAGGAGCTTTGCCTTGCTACAGGGATCATTTGCAACATGGCATTGACCGAAGCTGTTCTCACGATTGACGCTGAGGAACTTGGCCAAGAACAAATTCAACTCAGGGGACCTCTGGCTAGAATCCAGCGTTTGATGGTTGGCTTATTACCGCGATATTGCACCAAGGAAAACTGGGAAAAGATCGTTAAATCCATGATGGAGCAGCACAACGAGGAACCTGATGCCAAGTACAGTCTAGTTGCGATGGAAACTACCAAGAAATTGCAAAGCATTTGTTGTAACATTGTTGGTTTTTGCAAGACAGTTATGAGTTCGACAGGATCAGTTGGCTCTCATTGTCATGTACTCTTTGCACCTAATTTGACTGTATCTTTGTCTCGGGATTCCCGTCTCACAAGAGAAGCTGTTCGTCCTGTGATCGCTTTGTCTTCGTACCGATCTGTTAGTCTCGGTCTGCCGGTGTCATTCTTGAAGAAATGCAGTGAAGAGATCCTACAAACTGCTGAGTCGTGCTCCCAAACCCGGCTGAAGCTGCAGAATCTGACTGAGCTGTCCAGCGATGAACTCAGAGAGCTAAGTCAAGCAGAGTTTAACCGTGGAGCTTTGCAAGAGAGGCTTTCTACTCAGCTGAGATATCAGCTGGCACATAAATGCCTCACACAGATTGTGCGGTTTAAGGAACACGAAATTTCCTCTCTGTTGTATATTATCGAAAATTATTTGTTCATCATCTGGCGTCATTTAGATTTCTACTTCTTACATTGTATCCCGTCAGACGAGGAACGGCGCATGCGTGGGGGTCCTAGTTTGACCGATAATCGCATGAGACGACTGCAAGAATGGACTTCACAATCTGGAACTTCTTTTTCTCCCGATCCTGCTTTTGAAGGCCAACAGCTTGGAGGCGGTGTTACACGTGAGGAAATTGAAACACTCAAAAGAGAGGCCACCAGTACACTGACGGAGCTGTTTTTCAAGAAACTTGTAGAAATCGAACAGACTCACGGTAAGGGACGTACAAGACTTAGCTTTCTTCAAGTTCTTGTACGCCGCATAAAAGGACTGTTGACGATACACGGAACGCCCGCACGCACAGAGCCCCTTACCAGCGGATTACGATGA

Transcript

Protein

XP_074613351.1

MAAAREGMWRPYKELQATVERSLFKKRPEVYHELEVALKKFKPDLTSLLKNPPKNVDHRDKLKRAPTNGLQLTAHAEKQNLPEQFVQEVLILSDVLDLNEFVCTDLLLAGEQQQPNFPGLTRGLVAVLLYHDGRRCLVSALKILIQSREGITWTMGLNEDLSQLATKFTDELLQEGLITTILEQLQELDVQKELDKLERGQGIGDEHHKQQLIDFITDQRQLLAECLYCFACQAPLPKREALQLLSALKKCPSIDADGTLDSVTLTLLMAMLYCLNVDPLDEAAEIQSSIREETFPLLSDHRFIPEFHLEISEQESWQNQGMCSCIQFAWALVLRSCSHWPNLVGAVDVLEEDECVLDLAVDGCVFGFLRNCVVRASTFHQEEYFVQRLHSLVTGFIVKMPLKVKELRNQGDEAARIIQAHLQDGVEPPVGLSKHFEDFMKMMGDLYEKDPCGLELAADFWCPTDTGLGTSFSPYSTGMSSALRQRASQKQVSLNKFLRLAGDLLPPPLFVPYLDMLTGLANSPEAAHHCFNLLKSSANGPVSWDHFFGSLKQYYMDLRQDSGRSVMMYGSLTRETSLSHRPDMSNYNITPEELEGLEAVLSLTERVADKDEIARLAMCESQAWLPIASLFGLLGCSVPVKLKAQILTTLAAFAKSPEIASSMWFTLEQSQILQTITPTGQAVQPGGIQVELNELEARDETYPETRAFLKLLNNLTDIPLSSALGSGYRVPGFEPYLTFLRDDVFLKFSSRGYQNPNEKWIVASDVLQIFFKLLDGYTPKPEDFVDQFVELQGGDRIVVPKPPGLNLMVHMLNDTPTLRMLLSVIDGASTSLDHLTFNSEGKKELEKAALLCLRMIETALEKQEQFANTLRSVTQQSAIMVSRLEDLLLSINPRTSAADYLLKIMRYLCHLHTGADLSLSVVKILCLVCQSTQVQRHLISICMSNQSLSKKILIGFVDHLEINEPEDLHERDELGKDFVDETSHSVSQIRNAVRQNILRLILHSLQLPPPNLAHFLLGYELRKPVAKTNLQDPGVQGASKTCLHAVLDMLNKRVDTHQGPSCVTETPKFAELAYQLIYSLCANKDTATPTLRYLRTSHDFLYQHLQHLPFKKLVSIGSDGEQPTLPMQTIASQQSWLLKTAAIELRMTAQGRQRSHAQRLLGLLMGEHSALRPNLGTSQFQEMVPRRLEDDFTSADTSQAAYADMGQSQTRRKLLAILESVDFTQDVPPALQLNYFDAGVTEEAIASCEQKAEDIDVMFCNVPVLHKLLMTEITGVQGTATAGQRNFWIQEVRDILQNVVLRNMMRESLHIKKEAFEAWRRVIEVALASCPADIFPRETRQTVISEILQDLLCRIADESAIAELTSPVSGVILCLMAHLRQCTISLNSSTTPISIPESFGGSKSLQQSGSSLPVGASVAILKGLIETVLRSGGGLQRVRANLYAALMYFMQTAPETQETKEKGVMENVLSLYPGQSWDTSILPVLSSYGEPFMDAVSRDSCDGHDVGRMLAFSLLDAIIAVDWQQRWLNYLSIKGYLRHMTEALPHEDHILQSMLDPSPEPLKALYIYESKMALFARIAQSFEGAKVLLQAGLLSRLAECSFLDQRPEQERIGLSGSLYAYDQNMSEVTQDSFVPSVMERYRQLLMPALKVILAILTSLESQHEEASIKALHFVVSHIDVFVSILQDRQAVHTSGSLQELCLATGIICNMALTEAVLTIDAEELGQEQIQLRGPLARIQRLMVGLLPRYCTKENWEKIVKSMMEQHNEEPDAKYSLVAMETTKKLQSICCNIVGFCKTVMSSTGSVGSHCHVLFAPNLTVSLSRDSRLTREAVRPVIALSSYRSVSLGLPVSFLKKCSEEILQTAESCSQTRLKLQNLTELSSDELRELSQAEFNRGALQERLSTQLRYQLAHKCLTQIVRFKEHEISSLLYIIENYLFIIWRHLDFYFLHCIPSDEERRMRGGPSLTDNRMRRLQEWTSQSGTSFSPDPAFEGQQLGGGVTREEIETLKREATSTLTELFFKKLVEIEQTHGKGRTRLSFLQVLVRRIKGLLTIHGTPARTEPLTSGLR

Uniprot

Uniprot term	Description
Q92621	Nuclear pore complex protein Nup205 OS=Homo sapiens OX=9606 GN=NUP205 PE=1 SV=3
Q8IQV9	Nuclear pore complex protein Nup205 OS=Drosophila melanogaster OX=7227 GN=Nup205 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11894	Nup192	Nuclear pore complex scaffold, nucleoporins 186/192/205	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021827	Family	Nucleoporin Nup186/Nup192/Nup205	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31344	NUCLEAR PORE COMPLEX PROTEIN NUP205	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006999	Biological Process	nuclear pore organization	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0044611	Cellular Component	nuclear pore inner ring	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14310	NUP205, NUP192; nuclear pore complex protein Nup205	-	Chromosome and associated proteins	ko03036	deepkoala