Gene detail

Detailed information of XP_074613367.1 in Acropora palmata

Genomic Location: NC_133883.1:10377669...10405565
NR annotation: XP_044172723.1, zinc metalloproteinase-disintegrin-like berythractivase isoform X1 [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074613367.1

ATGAATTTGTCTATGATATCTTTGCTAATCATGGTGGCTCACCTGAACCTTTTTGGCAACACAGATTCGAAATTTTTGGATTGGAATAATTTCGAGCAGCAAATACGAAACTACGAAATTGTAGCTCCACGACTTCAAATTCAAGGTTTATGGAGGAGAGAAATATCAACAAGATCTAGCTTGGGTGATCATATCGACAAAGCGGTTTTCTTCTTCAGAGGATTTGGCAAGAATTTTGTTTTGGTTGTTACACAGAATCGGGTATTGCTGTCTGCCAATTATGTGTCAAGATCTTTTTCAGCAGATGGCGCTGAAGTTATTTCAGGGCACGAGAAAACTGATAATTGTTTCTACCAAGGGACTGTGCAGGGCTTACAACACTCTGTTGTTGCCATTAGCACTTGCCATGGAATTGAGGGAATGGTGTATGATGGAAATGAGACATACTTTATCCAACCACTGCCAGGAAATACAGAGCAACAGCATGTTTTGTTCCGTTCAAAAGACATGGTGCAGGGAGAAAAACGATGTGGCGTCGATCATTTCAAAGTTGCCCTTGACATGGAAAAAGATATTTTTAATGGACAACATCGGGTAAGACGAAATTTAAAGAATGAAATAAAATATGTGGAATTGATCATTGTCAATGATTATAGCCAGTATTCAAATCTAAGAACCATTGCTGAAGTGGAGAAGCGATCAAAGAGTATAGCCAATGTAGTAGACTCTCTTTTTCGTCCCATTAACGTTCGTGTGGCGTTAATAATGGTTGAAACGTGGAATCAACGTGATCGCATTGAAGTTGTTGAGGACTCCAACACATGTTTGGACAATTTTATGGTTTACAGGAATGGAGACCTGTGGAGAAAACAAAAACACGACAATGCAATGCTTATAACGCATCGTTCCTTTAAAGGTTCAACCGTTGGTAAGGCTGCTTTAATGTCAATGTGTGGTCGCAAGTCGGGAGGAGTCGTGCAGGATCATGCCGCAAATACCGCAGCTACCGCAGCAACAGTGGCTCATGAAATGGGACATAATTTTGGAATGCTTCACGACGAGGACATTAAAAGCTGCAAGTGCAATTCACCATCAGACAATCAAGGATGTATTATGTCTGAAGTAGCCAAGAGTACACCTTCCACAGAATGGTCATCATGTAGCAGGGAGTCGTATGAAAAGTATTTAAACAGAGGAATTGATTCTTGTTTGTTCAATGTACCGCAATCTTTGTTTGGAGATGCTGTCTGTGGTAATGGCTTCAAGGAAGAAGGCGAAGAGTGCGACTGTGGAAACGTCGAGGATTGTAAGAAGTACAGTGATGGTTGCTGCAATGCTACTACATGCAAACTGCATCCTGATTCTGAGTGTGATACAGGGGCTTGTTGTTCGAAATGTAAGCTTAAGCCTCAAGGTGTTGTTTGCCGGGAGAAGCTTAATGAATGTGATCTACCGGAATTTTGCACTGGTAAATCAGAATTGTGCCCTTCCAATAAGTACGTTCAAAATGGAAGGTCATGCGCGAACAACAACGGATATTGCTACAACGGTGAATGCCCAACGCATGACAAGCAATGCAAAGATTTGTGGGGCCATGAGGCAAAATCTGGTCCAGATGTGTGCTATGGGGCGAACGAGCAAGGTACAGTGCGAGGAAATTGCCATCAACCTGGAAACAATGTTTATATCAAGTGCACTCGGCAGAACAGACTTTGTGGAATGCTTCAATGTACAAACATAGATAAGATTGAATTACCAATCATTGGCTCTGATAAAAGCAGTTACCTACACTCTTTTGGCCGCATCTTGTGCAAGAGCACTTCTCTTTCTCTTGGTCGAGATGTCCCCGATCCGGGAATGACTGTGGAAGGAACGAAATGCGGAGAAAACAAGCTTTGTCTGGATCGAAACTGTGCGAGTATAGAGAGCGTTACTAACACAGTCAAAAGATGTCCAAACAACTGCTCTAACGACAACGGGATTTGTAACAACGAAGGGGATTGTTTTTGCCTGAGTTGTTGGCAAGGTGCAGACTGCAGTCAGTGGGTTAATTGTGGACAGGAAGGTGGTAATGGCACAAATCAAACTTACGTAGTCACGCCTACAACAGCAAACAACACTGAAACCACAGTGGTTTTTCAAGGGTCTCGAGAAAGTTCGGGAACAGTGGCGGCTGTCGTTGTGGTGTGCATTTTGCTTTTGGTTGGAGTTGCTCTTGGCGTTATTTATCGTAAAAGGTTGATGCAGAAATGGCGCGCTTGTCAGCTGAAAGCTCCTGGACCCAAACGGTATCAAGGTGTGCCTCATGGCTCTTCTGAACAAAATAATGAAAGAAGTAGGCCTGAAACTCGCAGTGACCTAGACGTAGAGGCTGCTAAAGCAAGGCCCAATATATCGGGACCAACACTCAACAGTACAACACGAAATGGCTCTGATCTTACTTTAAAACGCAATACCCTTAGTTCTACTAGTACTTCAAAGGAACCTGCCAAACAAGATAAGCCGGATAGAGAGCCTCTGATTGCTCTTAAACCAACGCCAAAAATACCCAATAAACAAGTCGAAGCAAAGTGTGAAACGAGCACAAAGTATCCTCCACCGAACCTTAGAACTCAAGAATGGCCCCGCAAGGATGAGAAAGATTCTTTGAATCGTGTATCTTCTCCAACAGAGATTAGTAAACCGGTTAATCCTATTAAATCATCTCGACCGAAAAGCCACGCGGGAATCTTGGATAAACCAGCTGTACCTCCTCCACCGTCAAGGAAAGAACCCGTGAAACCGCCTAAACCTCGACGACCAGAAAGCCTCGCGGGATTGGTTGACAAACACGAACCGGCTAAACCTTTCAAGCCCCGTCGCCCAGAAAGTCATGCAGGTGTGATTGACAAACCGGAAGCTGGAAAACGTGCTAAACCTCGTCGACCCGAAAGCCATGCAGGAGTCCTGGACAAACCAGCTTCTCCCTCTTGGAAAAAGCCATTACCGCCGTCGGCTGCTGGTGAGAAGAAGTCGGAAATGACAGGTGCCAGTAATCCTCCAGCCAATGCACCCAAAGTTCCTCGACTGCGGAGACAGTCATCGGAAGAAAGGCCAACTTCATTGCCTTTAAAACCATCTGACTTGAAAAAGGCCGGAGTTGCGACAGGAATCAAGAAACCTGCCTCCTTCTCAAAGGCCGATAAAAAGGTCGCCCTCAGACCACCTGGACCCATACCTCCGCGACCTGGAACGAAACCGACATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q61824	Disintegrin and metalloproteinase domain-containing protein 12 OS=Mus musculus OX=10090 GN=Adam12 PE=1 SV=2
O43184	Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ADAM12 PE=1 SV=3
O35674	Disintegrin and metalloproteinase domain-containing protein 19 OS=Mus musculus OX=10090 GN=Adam19 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000887 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08516 all species →	ADAM_CR	ADAM cysteine-rich	Family	Interproscan
PF00200 all species →	Disintegrin	Disintegrin	Domain	Interproscan
PF01562 all species →	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan
PF01421 all species →	Reprolysin	Reprolysin (M12B) family zinc metalloprotease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001590 all species →	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR001762 all species →	Domain	Disintegrin domain	Interproscan
IPR006586 all species →	Domain	ADAM, cysteine-rich domain	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR018358 all species →	Conserved_site	Disintegrin, conserved site	Interproscan
IPR002870 all species →	Domain	Peptidase M12B, propeptide	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR034027 all species →	Domain	Reprolysin domain, adamalysin-type	Interproscan
IPR036436 all species →	Homologous_superfamily	Disintegrin domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11905 all species →	ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_074613367.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.