Gene detail

Detailed information of XP_074615554.1 in Acropora palmata

Genomic Location: NC_133883.1:21529089...21548105
NR annotation: XP_029209679.2, drebrin-like protein B isoform X2 [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6H7G2	Drebrin-like protein OS=Bos taurus OX=9913 GN=DBNL PE=2 SV=1
Q62418	Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2
Q9JHL4	Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001629 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00241 all species →	Cofilin_ADF	Cofilin/tropomyosin-type actin-binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR002108 all species →	Domain	Actin-depolymerising factor homology domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR035717 all species →	Domain	Drebrin-like protein, SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10829 all species →	CORTACTIN AND DREBRIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0014069 all species →	Cellular Component	postsynaptic density	Interproscan
GO:0030027 all species →	Cellular Component	lamellipodium	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0030427 all species →	Cellular Component	site of polarized growth	Interproscan
GO:0030833 all species →	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0030864 all species →	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0045211 all species →	Cellular Component	postsynaptic membrane	Interproscan
GO:0045773 all species →	Biological Process	positive regulation of axon extension	Interproscan
GO:0048812 all species →	Biological Process	neuron projection morphogenesis	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0061003 all species →	Biological Process	positive regulation of dendritic spine morphogenesis	Interproscan
GO:0098974 all species →	Biological Process	postsynaptic actin cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20520	DBNL, ABP1; drebrin-like protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.