Detailed information of XP_074615596.1 in Acropora palmata

Genomic Location: NC_133883.1:12250606...12255284
NR annotation: XP_015755428.1, PREDICTED: hairy/enhancer-of-split related with YRPW motif protein-like [Acropora digitifera]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7KM13Hairy/enhancer-of-split related with YRPW motif protein OS=Drosophila melanogaster OX=7227 GN=Hey PE=2 SV=1
Q7TS99Hairy and enhancer of split-related protein HELT OS=Mus musculus OX=10090 GN=Helt PE=1 SV=1
A6NFD8Hairy and enhancer of split-related protein HELT OS=Homo sapiens OX=9606 GN=HELT PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009726 (this species only)
Transcription factor familybHLH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07527
all species →
Hairy_orangeHairy OrangeDomainInterproscan
PF00010
all species →
HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003650
all species →
DomainOrange domainInterproscan
IPR011598
all species →
DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050370
all species →
FamilyHairy and Enhancer of Split/HEY-relatedInterproscan
IPR036638
all species →
Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10985
all species →
BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983
all species →
Molecular Functionprotein dimerization activityInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952
all species →
Biological Processanterior/posterior pattern specificationInterproscan
GO:0050767
all species →
Biological Processregulation of neurogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074615596.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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