Gene detail

Detailed information of XP_074615673.1 in Acropora palmata

Genomic Location: NC_133883.1:23764773...23767994
NR annotation: XP_015771545.1, PREDICTED: 60S ribosomal protein L26-like [Acropora digitifera]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P61257	Large ribosomal subunit protein uL24 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1
P61254	Large ribosomal subunit protein uL24 OS=Homo sapiens OX=9606 GN=RPL26 PE=1 SV=1
P61256	Large ribosomal subunit protein uL24 OS=Macaca fascicularis OX=9541 GN=RPL26 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008736 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16906 all species →	Ribosomal_L26	Ribosomal proteins L26 eukaryotic, L24P archaeal	Family	Interproscan
PF00467 all species →	KOW	KOW motif	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041988 all species →	Domain	Large ribosomal subunit protein uL24, KOW domain	Interproscan
IPR005756 all species →	Family	Large ribosomal subunit protein uL24, eukaryotic/archaeal	Interproscan
IPR005824 all species →	Domain	KOW	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11143 all species →	60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02898	RP-L26e, RPL26; large subunit ribosomal protein L26e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.