Gene detail

Detailed information of XP_074616389.1 in Acropora palmata

Genomic Location: NC_133884.1:10069107...10087301
NR annotation: XP_029201395.2, ankyrin repeat and SAM domain-containing protein 6-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074616389.1

ATGGATTCCAGAGTAAGTAGGCTACTGGTGGCTGCAGAACAGGGGAACTTGCACCAAGTTACAGATCTTCTTCTCGAGAAAGGTTACCATGTTGATTGGACCGATGAAGAAGGGGTAAACGCGTTGCACATTGCTGCTGCAAACGGCAACGATAACGTGGTTCGTTTGCTGTTGTCGAGGGGCGCAAGTTTAGAAGCCAAAACTATTTACGGATGGACTGCTTTGATGCTTGCGTCTTGTAATGGACATTTAATAGTCTGTTGGACTTTATTACAACATAAATCAGACATTCATGCGAAAAATTTTCTCGGTTCAACGGCTTTGGAGTGCGCCGCAAGAAATGGTCATGTGCAAATTGTGGCGTTGTTGATAGAGGCATGCGGACAACAGGTGCTTGAAAACAGCACAACAAGTTTAGAGTTGAGCTTGAATGCGTCCCTTATTAATGCGGCTGAACATGGTCAAGAAAGTACGTTAAGATTACTACTCGAGAAGGGAGCTGATGTAAATTTTCGGGAAGAAACGACGGGATGGACAGCTCTTATGCTCGCGGCTTTGAACGGGCATATGGCGGCTGCCCAACTCTTGGTAGAATTCGGAGCAGATACGAATGCCCAAAACGTTATAAACCAGACGGCTTTAGAAGTAGCTATTGTACGTCAGAAAACTGAAGTACAAGAATTTCTCGACGAAAGAACCTCCACAAGACCGCAAATAACAGGTCAGAAGAGCAATCGACCAAGCATCATTGAAGCAGCAAGAACTGGTAACTTGGTACTTGTCAGAGAATTGTTGTACCAGGGAGAAGTTGACAAAAATTCAACTGATGAAGATGGTGCAACACCTCTTATGTATGCTGCTATGGGAGGACACTTGCCTGTGGTGCAGTTGCTAATTGACATACGTGCTGACATTGATAAACAAGATAAAGTCAGTGGCTGGACAGCTCTGATGCAAGCAACATACCATGGATTTACGGAAATTGCCAGGTTGCTGATAGAATCAGGAGCAGATGTCAACATTCAGGGAAATAATGGGTGCAGAGCTTTTGACATTGGTTCTATTATAGGTAATACCGAGATTGTGCGTCTTTTGGCTTCCGTAAGCATGCAGATGCTATCCACCCCTAAAAGTTATTATAGGAATTCACTTTCATCTTTATCTGAAAAAGTACAGAGTGACACTAAAGACATCATTAGTGGATCAGAAAAGGAGATTTCTAAGATTGACAGTGACTTTCTCAAAGTTCAGGGAGGAAAGCTTAGATGGTGGTCAAAACTCTCTGGCAGATTTCGCAACCTCAGCGTCAATCGCACTTTTTCAAGTAATAAGATTCAGGTGATGCATTTGTCCAAGAGTATGGAAGAGCTGGCTATAAAGGAGAACAAGGAAGAGGGTTCAGTGTCTGAATTGCCCAGATCTGTAGGCACGGTCTCAGCAGTAACACTGAGATCTCTTGCATCGGTAATTACAGACTCTGCTTTAAAGCGTTCAGGAGGTTACAGGCCTCAGTCATTGGCATTGGTATCACATGTCACCAAACTTCCAGATGATGTCATAACTCCTGTTGTTCCACCTCCTCTTCCTTCGTCATCATTTGAGTTACCAAGTTTACAGCATCATCACCGCAACGGTAGTGTGGAGAAAGGGTCCAGAGCTGGACATCCAAGCAGCATTAGTGCTTATTCAACGTTTTTGCCATCTCCTACTCATAAACAAGGTGAAGGTGGAAAAGTGGGAAGTCCAGATTCATCTTACTCCAATGCAAGCTTTTACTCTTCCACTTCCTACAATTCGGGCTCCAGGACATTAAGAGCATCAAGTCCTTTATCCGACACAGCAATTAATCCGATGTCTGCCATGTCATCTTCTTTGTGGTACAAGGCTGGAAGGAGCTGTATCAGCCCAATGCCCACTCTTATCTCTGTACAGTCTGTGCCTGATGAAGACTCAGCTCAACAGCAGGAATCAGGCTACTCGTCATTACATGGATATGTAGATTATGAGCCTAGATGTCGGTCTACTCAGGCAAGAAGTAGCTTCTGTAACACATTTGACTCTTGTGAAGATGATGTTGAGAATTTGCTCAAGAAACTTTCATTGGAAAAGTATCAGTCAAATTTTGAGGAGCAAGAGGTGGATATGGAAGCATTCCTCACACTAAATGATTCAGATCTCACTGATCTTGGAGTGACACAGAAATTTGCTAGACAACAGATCCTCACAGCCATTTCTGAACTTAACTGTGGCAAGGATCGTCAGAGGCAACATCAACATGAGGCACTTTCTAACTACCATGGCAGCAAATCACCTGGTTCTAGTGGCTATGTCTCGCCATCATCAAGCAGCAATTTGCCTCCTTGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q5XJ13	Ankyrin repeat and SAM domain-containing protein 6 OS=Danio rerio OX=7955 GN=anks6 PE=2 SV=1
P0C0T2	Ankyrin repeat and SAM domain-containing protein 6 OS=Rattus norvegicus OX=10116 GN=Anks6 PE=1 SV=2
Q68DC2	Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens OX=9606 GN=ANKS6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00536	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001660	Domain	Sterile alpha motif domain	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR052391	Family	E3 Ligase Complex Components and Neurotoxins	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24133	ANKYRIN DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21415	ANKS6; ankyrin repeat and SAM domain-containing protein 6	-	Cilium and associated proteins	ko03037	deepkoala