Detailed information of XP_074618149.1 in Acropora palmata

Genomic Location: NC_133882.1:15391402...15407158
NR annotation: XP_029208313.2, geranylgeranyl transferase type-1 subunit beta-like isoform X1 [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BUY9Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus OX=10090 GN=Pggt1b PE=1 SV=1
P53610Geranylgeranyl transferase type-1 subunit beta OS=Rattus norvegicus OX=10116 GN=Pggt1b PE=1 SV=1
Q5EAD5Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus OX=9913 GN=PGGT1B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005070 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00432
all species →		PrenyltransPrenyltransferase and squalene oxidase repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001330
all species →		RepeatPFTB repeatInterproscan
IPR008930
all species →		Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan
IPR041960
all species →		FamilyGeranylgeranyl transferase type-1 subunit betaInterproscan
IPR045089
all species →		FamilyPrenyltransferase subunit betaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11774
all species →		GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004661
all species →		Molecular Functionprotein geranylgeranyltransferase activityInterproscan
GO:0005953
all species →		Cellular ComponentCAAX-protein geranylgeranyltransferase complexInterproscan
GO:0018344
all species →		Biological Processprotein geranylgeranylationInterproscan
GO:0004662
all species →		Molecular FunctionCAAX-protein geranylgeranyltransferase activityInterproscan
GO:0008318
all species →		Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342
all species →		Biological Processprotein prenylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11713PGTB1; geranylgeranyl transferase type-1 subunit betaEC:2.5.1.59
Prenyltransferasesko01006deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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