Detailed information of XP_074619039.1 in Acropora palmata

Genomic Location: NC_133884.1:9037771...9058885
NR annotation: XP_029191110.2, enhancer of mRNA-decapping protein 4-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q1LUT1Enhancer of mRNA-decapping protein 4 OS=Danio rerio OX=7955 GN=edc4 PE=3 SV=1
Q7ZXT3Enhancer of mRNA-decapping protein 4 OS=Xenopus laevis OX=8355 GN=edc4 PE=2 SV=1
Q6P2E9Enhancer of mRNA-decapping protein 4 OS=Homo sapiens OX=9606 GN=EDC4 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16529Ge1_WD40WD40 region of Ge1, enhancer of mRNA-decapping proteinRepeatInterproscan
PF21289EDC4_CEnhancer of mRNA-decapping protein 4, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR044938Homologous_superfamilyEnhancer of mRNA-decapping protein 4, conserved C-terminal domain superfamilyInterproscan
IPR045152FamilyEnhancer of mRNA-decapping protein 4-likeInterproscan
IPR032401DomainEnhancer of mRNA-decapping protein 4, WD40 repeat regionInterproscan
IPR049404DomainEnhancer of mRNA-decapping protein 4, C-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15598ENHANCER OF MRNA-DECAPPING PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0031087Biological Processdeadenylation-independent decapping of nuclear-transcribed mRNAInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12616EDC4; enhancer of mRNA-decapping protein 4-Messenger RNA biogenesisko03019deepkoala

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