Detailed information of XP_074619051.1 in Acropora palmata

Genomic Location: NC_133884.1:18572698...18652621
NR annotation: XP_044174480.1, uncharacterized protein LOC114956221 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q05895Thrombospondin-3 OS=Mus musculus OX=10090 GN=Thbs3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR024731DomainEGF domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06825FBN1; fibrillin 1-Glycosaminoglycan binding proteinsko00536deepkoala

TOP