Gene detail

Detailed information of XP_074619486.1 in Acropora palmata

Genomic Location: NC_133885.1:5764512...5798130
NR annotation: XP_044176418.1, hemicentin-1-like [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074619486.1

ATGGCACGTTTATGGATACACGAATGTTTGCTACTCATCAGCGTCTTTATTCTTTCCCATTCGTCAGGGGAATTTCCACCAACATTTATCCACAAAAGCAGAGGGCAGTATCTTTTTGCTTTTAAAGGCGACTCAGTTGATATCAATTGTCAAGTGAATGACACACTGGCACAAGTGGAATTGCTTCAAGATTTGGCTGGGAAGGGCAGACTTACTCGAGTTCCAGATGATGTGAAGGTTATGCAGAGTGGACAGATTTTTACCATAAAAGATGTGCAGTCCTCGGATAGGGGTTCATTCTGGTGTAGAATCAAAAAAGAAAGAACATGGGTTCTTCGGGCTGAGACCCTTTACCCTTTAACTGCGTCGCAAAAAAATTATATCTTGAGCCAGGATGTTACCCCTCCTAGCATATCCATCAGGGAAGGAGAAAGTGCTTCCTTTGTTTGCAAAGTTAGTGGGAGTGGAATTAGAAGTATAGGATGGTACAAGGATAAATTAAAGCTCCTTGACAGATATGTTGTATATAACAATACCAAAGACCACAACATTAGTACTATTCAACTGCCTGCCGTTACAGTTGCCCAAGGTGGCATGTATGAATGCCGAGCAAGTGTTAAGGGTCCTGCCTATTTCAAAGTGGAGAGTTACAAAGCTCAGTCAGCAATGCTGTTTGTTACAGCATTTCATTTTCTTGCACGGCAAAAAAAAACTGAGAAGCTGTTTGTGGGGGGCAATGTTACAATCAACTGCAGAACCAGCGAAGAGAGAGTTTCCTCCACACTGTGGGTTAGGAAAGGCATAAATCCAGCACAGATGGTCATTCCAAATGGTAAAACTATTGTACAGAGAAGAAACAGATTTTATTTTAGTCACATATCCTTGGATGATGCAGGTATCTACATATGCAAAGCCATTTTTTCACGCATTCAGAAGAGGATTGAAGAAGAAATAACAAGTTTATTGGTCTTTACAGATGACGTGAAGAAACCCAACGCTCAGGTATATCCCGTTGTTAAGGAAGTCCTTATTGGAGAGGACTTCAATTTCTCTTGTCATGCTCCTGGTAACAGCCTCTCCTTCCAGTGGCTGAAAAATGGTCGACCTATCCCCAACAATCAAACGTTTCGAAAAGCAAGTAAAACTGTTAAAGGAGTAACATTTAGTGAAAATGTCCTCTTGATCAAAGTGGCTACAAAGCAGCATGATGCTAATTACACTTGTGTCGTGATGACGCCTTCAAACCCAACTTATTCAAGCAAAGCAACTGCTTCTCTGCTTGTCAAAGAATGTCATGTCCCGAATGGCAAGTTTAGGGATCCAGCAGATATATATGGTTACTTTGAGTGCAAAAAGGGAACTGTTGTGAAGAAATCCTGTCCAAACGGCCAACAATGGTACCCAGATGAAGTAAAATGCAAAACTAGTCTCGTTTGGGTGGTTGACCATCCTAGTTACTATGCTCTCCTGTTGTGCCAACCCTTTATACTGGACTGTCGCTTGAATGATCCTGGTGTTCCTGTGCTACTGTATGGCGGGAAGTTGCGTGACCCAAGTAGTCTTGTTAAATTGGAACCAAAAACGTATCCACTTATCGCACAGAATGGCCAGACTTTCGCTATCAATGTCTCTGCGCTTACTTCATTTGGAAGCAGTTTCAAATTTGAATGTAGGGCTCTCAATGGGGATGGCCAACTTATTCTGCGTAAAAAAATGGTCCTTTCAAAAGCAAGAGATTTCGAAAGAGCGATCTTTGTTGAAGTCCTTCCAACATGCTCCCGTGGTCCACTGAATGTTGGTGATTCCATTAACATAACATGCCACTCCTATCATTTTGGGAAAATAAAATGGTACAAGATAGATCCGTCTACTAAAGAAGCCAAAGAAATCACGGACGAACAAAAAGTCAAACGAAGTCACGAGTATACAAGACATGGACGTGATCAGACGAATCTGACGCTGTACCTTCGTGACGTAACAGTAAGCGATACTGGAGCCTACGTTTGTTCAAAATCAAATGGTTTGCCAAATGAAACAAGAAATGTTACAGTTTCCATAGAAATTTCTGGTCCCTCGTCAGCTTCTATAAATGAACTGACACCTCAAAAGTTGGCCGTAAGGGAATTCAAACGTGCCGCATTCAAGTGCACTGTCGGTGGTTCTCCGCGACCGAATGTTACTTGGATAAGAGGAAAAGAAATTATCGCGGATTGCGACGGAAGGCAGTACGGCAAATGTAACAACAGAGGCAATTCTAGATACAAGGTGCAGTGGAAAGACGAGCGAGGGTGTATGCTTAACCCCTCTATGGGCCAAGTCAGCGGAACGTGGATTAGTTCGCTTCGAATCCGTAACACACGCTTCCCTGCTGATGCAGTGGAATATGCATGTGTAGTTTCTAACGGTATAGGACCAGCACGAAGGCAACATGCCTCGCTTGAGATTTACGTTGCCCCTAAGTTGAAATCTACTCAAAGAAACGGGGCTGAGAAAGTATGGGGTGATAAAGGCCAGCCTTATAGAATAGCGTGTGAAACAGAACGCAGCAATCCTCCTGCGGAATTCTTTTGGACTTATCAGCTTCTCAATTGTCCATCTGGCATTCAGGGATGCCTTCCTGCTAAAGAAAGTGACTGGAGAAATTACACGCTCGGGGAAGTGCAAAAGATGTCATCTAACACCAGTGTCCTTATTGTCCCAGAAAACGTCGACCGAATGTATTTCAGATGCGTTGCAGTCAACCCTGCCACGCGTCAAATGGATTCCGTTCAATATCAATTCGTGCAAATACAGAAACAGAACGAAACGGATATTATGAAGATAACCCCTGCGTCGTTTGTTGTCGAAAATGTTGGAAGAAGTATCACTGTGCGCTGCCAAGCTAAACTAGGAACTGTCAAGCGTGCACCATCCTGGTATATCGATGGTCGGTTAATCGGAAGGGACTTGGTGAATTCCATGAGTGTTAGAAGCTGGACTTCAACCAATGTGGTCAGCGAATTGCGCATCATAAACGCTCAGTTGGATCATAGTGGTCGGTATGTATGTTCCGCTGAGAGGATCGATGGCGATTGGACTGTGAAGTTTTTAATCTTGACCTTGAGAGAGCTTGTCAAACCAAAAGTTCTCATCAGTTCTAATAAGACCATCGATAAAGGACAACATGCTCTTCTTCGCTGCAATGTTACTGGAAACCCGACTCCAAACATCACTTGGTTCAGAAATGATAAGGAAATCGAAATGAGTGGAATGGTCAAAAATTGTAAACAGCTCAAAAATGGTTTCTATGGAATGAAGCCGCGCGAGTCTGGCTCGAGAGGTACACATCCGCAAACAAGTTTATTTGTTTGTTTCACGTCCCACTCAAAGAACACTGGTTCTTATAAATGCCTGGCGAAGAACAGTAAAGGAACGGCCTCTGCTGAGACTTATCTAAATGTTTTAGAAAAACCCACAGTTCGAATTCAGAGCGCTGATCTTTTCGATGAAATTGAGCTGATTTGTAGCGCAACTGGAAACCCTATTCCTTCAGTGTCGTGGCAGAAAGAGTCCAGCAACGGCTCCTTTGTCGCTTTACCAGGGAAAGATGGCGAGTGGGTGATGAGGTCGAGCGTTATCCAGCGACCAAAGGATGCAGCGGGAACTTACAGATGCGTAGCAATTAACACATTAGGAAGTGATAACAAAACTGAAAAACTTCAGTCTGTTGGTCCTCCAGTTCTAGGTAGTTTTCAAGAGAGAAGAAATGACAAGTCTTCTAAGGAGCTTGTCGTCGGTATGCTTATATGCGGCGGACTGTTGCTGGGGTTGGTTCTTGTCGTGGTAGCAATTCTTTATCGAAGGAAGAAAAAATATGGTGGTTTCTTCATCCTCACACTTCCCCCGCGTCCCGACTACATAATGAAGTTGGATCCTGAGCGGTCCCTTCTGGAACAGACCAATATGCTACCTTACGACGCCCTGTGGGAATTCCCAAGGGAGCGCATTCATAAGGTTAAGCCCTTGGGATCGGGAGCTTTCGGCCAGGTATTTCTCGCACAAGCAACTGGAATAATAGCGTTTGATCCTCGTGGCAGTACGAAGCGAAAACCACGTCGCAGAAGGTCAAGATTTGGATCAACTAGTCGGCCATATTACAACGATAAAAAAGTGACTGCGGTTGCAGTAAAGTGTCTCAAGGATGGTGCAACGGAAGCGGAATACAAAGACTTGTTATCAGAACTGAAGATTTTAATCCACATTGGGGAACACAAGAATATCGTAAACTTACTTGGAGCTTGTACAAAAGGTTTGGAGCGTGATCTGTGGATTATAATTGAGTACTGCGAACATGGCAACCTGCTTGAATTTCTGCGCAAGCGCAGAGACATATTCACGGCGACATGGACCGCGCCCACCGAACACGCTGACGTCACATTCACAACAATCGATTTGTACATTTGTGCGTTGCAAGTTGCACGGGCCATGGAATTCTTAGCATCCCGAAGGTGTGTTCATCGCGATCTCGCTGCTAGGAATGTGTTAGTTGGCGAGAACTACGTTTTGAAGGTAGCTGACTTTGGCCTGGCAAGAGACATCTACAAAGACGAGCATTACGTCAAGACAACTGCAGGTCTTCTTCCAGTTAAGTGGATGGCCATCGAGGCATTGGTTGATCGCATTTATACCCCAAAAAGCGACGTATGGTCCTTTGGGGTTCTGTTGTGGGAACTTTTCACACTTGGTGGAAATCCTTATCCAGGCCACCCGGCCAATGAGGTGTACCAGTACTTGATGGAGGGCCATCGCATGGATATTCCTCACGATTGCCCTGATGAAATGTACGAGTTGATGTGTCTTTGTTGGCAACACAGCCCAGATGATAGGCCTTCCTTTGGGGATCTTGTGGGGCGAGTTGATAAACTTCTGGATGACAGAACAAATGAGGCTGGGGAAGGATATCTGGAGCTGGCAGATGACATGGGAGACCTACAGGAACCAACATTTGAGGACGAATATCTTGACCCCGAGGTCAAACTGCTTCCTTCACCCAGTAGTCTCACTTCAGAAGATAGAATGAACTTCCCCCTCCCACCCCTTCCTCAAGACGAAATCGAACTAGACACCTTTCATGCCTTGGCTGATCCTGAAGCTGAAGAGAAGCAGAAATTCATTGTTTTGGATTCACCAAAGAAAAAACGAAGCGATCGCGTGGACAGCGAATTGGAGAAAGTGCGCAAAGATACGCTAGAGAGAGAGAAAGACGGCCGTGAAGGCTCCTTTTTCAGCGACAAAGAACAACTTCGCTCGTACGATGAAGACAGGGACATCTGTGAAAGGAATTCTGGCGTTTTTGACCTTCCAATCGCACCTGAGCCGTCGAATGCGCACACTCTTGAAGTCCCACCGCAGGAGACTGGTTACTACGACGACAAGCGGCCTCCTCCCCAGGAAGGGGTTCAATGCAAAACCGGAAACGGTTTCTTATCCAGGCAGCTATCAAACAGATATGTAAATTCTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P18461	Fibroblast growth factor receptor 2 OS=Gallus gallus OX=9031 GN=FGFR2 PE=2 SV=1
Q91147	Fibroblast growth factor receptor 2 OS=Notophthalmus viridescens OX=8316 GN=FGFR2 PE=2 SV=1
P11362	Fibroblast growth factor receptor 1 OS=Homo sapiens OX=9606 GN=FGFR1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000349 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00047 all species →	ig	Immunoglobulin domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF07686 all species →	V-set	Immunoglobulin V-set domain	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013151 all species →	Domain	Immunoglobulin	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR001824 all species →	Conserved_site	Tyrosine-protein kinase, receptor class III, conserved site	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR013106 all species →	Domain	Immunoglobulin V-set domain	Interproscan
IPR036508 all species →	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0008061 all species →	Molecular Function	chitin binding	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05096	FLT1, VEGFR1; FMS-like tyrosine kinase 1	EC:2.7.10.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_074619486.1 across 84 RNA-seq samples of Acropora palmata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

84Samples

84TPM > 0

2Conditions

199.6Max TPM

37.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
all_coral_tissue · exposed	46	46	44.83	199.63
all_coral_tissue · baseline	38	38	28.45	53.33

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR8800073	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	199.63
SRR8800034	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	174.65
SRR8800033	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	104.23
SRR8800045	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	104.05
SRR8800105	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	72.14
SRR8800093	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	69.19
SRR8800066	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	65.55
SRR8800080	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	63.85
SRR8800042	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	63.76
SRR8800039	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	61.20
SRR8800068	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	57.00
SRR8800099	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	56.75
SRR8800075	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	55.81
SRR8800036	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	50.74
SRR8800079	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	47.21
SRR8800097	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	46.31
SRR8800083	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	45.09
SRR8800051	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	43.55
SRR8800077	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	43.16
SRR8800092	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	42.71
SRR8800056	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	41.90
SRR8800088	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	36.53
SRR8800044	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	35.01
SRR8800100	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	34.93
SRR8800086	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	34.07
SRR8800071	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	33.68
SRR8800058	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	30.62
SRR8800053	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	28.60
SRR8800038	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	27.42
SRR8800026	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	26.99
SRR8800029	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	25.38
SRR8800087	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	24.01
SRR8800028	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	21.35
SRR8800091	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	18.09
SRR8800065	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	18.01
SRR8800063	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	17.31
SRR8800047	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	17.11
SRR8800107	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	17.09
SRR8800061	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	16.27
SRR8800040	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	16.05
SRR8800027	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	15.08
SRR8800094	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	14.84
SRR8800060	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	13.82
SRR8800062	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	13.79
SRR8800089	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	9.02
SRR8800095	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	8.40
SRR8800057	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	53.33
SRR8800106	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	52.84
SRR8800074	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	48.50
SRR8800069	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	47.34
SRR8800043	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	47.16
SRR8800052	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	46.66
SRR8800096	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	43.43
SRR8800067	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	40.47
SRR8800078	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	37.79
SRR8800109	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	37.41
SRR8800041	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	36.86
SRR8800101	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	36.54
SRR8800035	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	35.01
SRR8800081	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.77
SRR8800048	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.36
SRR8800032	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	33.26
SRR8800108	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	33.14
SRR8800072	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	32.51
SRR8800104	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	31.89
SRR8800076	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	31.78
SRR8800082	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	31.73
SRR8800049	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	30.30
SRR8800098	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	30.08
SRR8800037	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	28.98
SRR8800050	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	27.63
SRR8800103	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	17.23
SRR8800055	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	14.44
SRR8800102	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	13.89
SRR8800084	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	13.57
SRR8800031	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	12.75
SRR8800030	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	11.57
SRR8800059	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	10.84
SRR8800046	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	10.54
SRR8800070	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	9.62
SRR8800090	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	8.83
SRR8800085	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	5.83
SRR8800064	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	4.82
SRR8800054	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	3.28

Source: CnidoSite RNA-seq expression matrices (APALM_TPM, StringTie quantification over 84 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.