Detailed information of XP_074619634.1 in Acropora palmata

Genomic Location: NC_133885.1:10693852...10731109
NR annotation: XP_029213132.2, LOW QUALITY PROTEIN: protein furry homolog [Acropora millepora]
Species Acropora palmata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O94915Protein furry homolog-like OS=Homo sapiens OX=9606 GN=FRYL PE=1 SV=2
E9Q8I9Protein furry homolog OS=Mus musculus OX=10090 GN=Fry PE=1 SV=1
Q5TBA9Protein furry homolog OS=Homo sapiens OX=9606 GN=FRY PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002676 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19421
all species →
Fry_CFurry protein C-terminalDomainInterproscan
PF14225
all species →
MOR2-PAG1_CCell morphogenesis C-terminalFamilyInterproscan
PF14228
all species →
MOR2-PAG1_midCell morphogenesis central regionFamilyInterproscan
PF14222
all species →
MOR2-PAG1_NCell morphogenesis N-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045842
all species →
DomainProtein furry, C-terminalInterproscan
IPR025481
all species →
DomainCell morphogenesis protein C-terminalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR029473
all species →
DomainCell morphogenesis central regionInterproscan
IPR039867
all species →
FamilyProtein furry/Tao3/Mor2Interproscan
IPR025614
all species →
DomainCell morphogenesis protein N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12295
all species →
FURRY-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000902
all species →
Biological Processcell morphogenesisInterproscan
GO:0005938
all species →
Cellular Componentcell cortexInterproscan
GO:0030427
all species →
Cellular Componentsite of polarized growthInterproscan
GO:0031175
all species →
Biological Processneuron projection developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074619634.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_074619634.1 across 84 RNA-seq samples of Acropora palmata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

84Samples
0TPM > 0
2Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
all_coral_tissue · exposed 46 0 0.00 0.00
all_coral_tissue · baseline 38 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (APALM_TPM, StringTie quantification over 84 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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