Gene detail

Detailed information of XP_074620327.1 in Acropora palmata

Genomic Location: NC_133885.1:17435745...17457143
NR annotation: XP_044177213.1, uncharacterized protein LOC114969872 isoform X1 [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074620327.1

ATGGCGGCTTTAAAGCACGGGTCAAGAAAATTTTATGAGATCCCGAGCGAAAATTTGCAATATGTGAGGCACGATCGTGAAGTTAAAAATCATAAAAAGATCGAAGAGCTCTTCAAGTATATCGAAAACAGCTGCATTGGAAAGGATTTAACCTTTACGGGTCCGTATGGACTTCGGAAGGTTATCTACTGTGACTATACAGCATCTGGAAGGTCTTTATCATTCATTGAAGATTACATTCAAGAGCAAGTCTTACCACACTATGGTAATACACATACAACAACAACGGTTACATCACTACAAACCACTTTGTATCGGCATGAAGCCAGGGACATCATCAGGAATGCAGTGAATGCAAGTGAACATGATTCCGTGATATTTGTGGGAAATGGTGTCACTGGAGGTGTTCACAAGTTAATTCATGCCCTTGATCTGAAGAAACCACCGGTTGTTTTTGTTGGACCATTTGAACATCATTCAAACCTTCTCCCTTGGAAAGAGATTAGAGCAAAGGTTGTATGGATCAAGCAAGACCTCACAGGTCAGGTCGACTTATCAGATTTGGAAATGAAACTTAAGCTCCATTCTCCAAAAGGGGATACTCAGCTGATCGGATGTTTCTCTGCAGCATCAAATGTGACAGGGATCCTCACAGACACTAATGCTGTTACTGCTTGTTTGCACCAATATGATGCCTTGGCTTTTTGGGATTATGCCACAGCAGGTCCATATGTGAAAATCAACATGAATCCATTTGTAACAAGTGAACAAGGCTTGGTCCATAAGGATGCAATTTTTATTTCAACACACAAGTTTGTAGGTGGAGTTCAAACACCAGGTATTCTTGTAGCCAAGAAAAAGTTGTTTGAGAACCCTGTTCCATCAGGATGTGGTGGAGGCTCTGTGTTTTTTGTGACAGAAAACTCTCACAGGTATCTCAAAGAGATTGAGATGAGAGAGGAATCAGGAACCCCAGCCATTGTGGGTGATGTCAGGGCTGGATTAGTATTTCAGCTAAAACAGGACATCGGAGCATCTTCCATCATGGCTAAAGAAGAGAATTTATGCAGGAGAGCATTGGCTTCATGGGAAAACATTGAGGATCTTATTATTCTGGGCAACACAGCAGTCTCCAGGCTGGCCATCTTCTCATTTGTAATAAGGCACCCAATCTCAGGGGTGCTCTTACATCACAATTATGTGTGTGCCCTGCTCAATGACTTGTTTGGAATACAGGCCCGTGGAGGATGTGCATGTGCAGGCCCCTATGCTCAGAACCTTTTGGGGATCAATGAGAAGTTGGCAAAAGAAATTGAAGCTCTTATATTAGAAGACAGGATTCACCTTCGACGTTACAACGAATATTCGGAACGCGAAATTTTACGGCCAGGCTTTGTGCGGCTTAATCTTCCGTATTTCATGTCGGACGATGCTGTCCACTTTGTTTTAGAAGCCGTAAAAATGGTTGCAGAACATGGTTGGAAACTATTACCACGGTACATGTTTAATCCTGAGACCGGAGGGTGGAAACACAGGACACATCAGGTTTTCCGGGATCGTAAATGGCTGGGATCAATCTCATACGCACAAGGTCACATGACTTATCCGTCATCGCCGTTGAACGCGGAAGTTCCAAGCTCCTTCATGCAATGTCTACGGGAAGCAGAGGAGTTGTTTCAGAGGGCGAGCATAGAAACGTCAATTCATAGTGTTGGTGATCAAAGGTTGCTGCTGGGTGAAGAAGGAGAAAAACTGCGCTGGTTTTTATTCCCTAGTGAGGCCGCGTTGCTTTTACGCGGCAAAGAACCCGCATATTTTCCTCTGAAGTCGCCATTTACACCGATTAAATGGAAAGATGTTATGCCTTTGACTCAAGGGACGAATTTAACGGGGCCTCCATGCGTGGAGCACTTTGAAAGGTCTTCTACAAACTCTACACCGTCAGTCCTTTCGAATGGAAAAACTACAACGTCGACACATATTGTTGGAAAAAGTGTCATTGAGAAAGAAATGAGGGGACGTATTTTTGTTGCTGATGGCAAAGACTGTGACAAAGGACATCTGATTACATCCCAGCGAACGGGTGAAAACCAAGATCCGAACAAAGCCCTCGAAGAGGTTCTTTCTTATGTAAATGAAGAATATCATGCTTTGAAAATTGAAAGCCAAAATGCGGAGGACGGATGGAGCGATAAAGGCCGGGGAATAGATCGCATACCAAATGGGTATTGTTCAGCTGAGATGGGGGACTGCAGTGTATCTCAAGTTGACGGACAGGTATTCACAAATGGAACGAACGATTTATTGAACGACCATGAGGGCGATTCCAAGTTTGTTGTTGAACAGACTATAAGCAAAGCAAGTTCCGAAGAGAGGCGGAAAGAATCGAAAGAAGATTACGAAGGTGTTATTGATGTAAAAGTTGCTTACGAGCAGAACAATGAGAAGAAGTGTAAAAGAAAAGAAATGTCGCGCACGCCACAATTCCATCATCCGCCCAAAAGCATCTTCAAGCCAACTACACAGGCCATTGAAGAATACGAGATGATTTGTGACGGTGACCGTGTATTGGTGTGCCTGTCGGGAGGAAAGGATTCGCTCTCTCTCCTTCACACTTTACATCAATTTCAGTTCTATAGCAAATCAAAGGGAATCACTTTTGAACTTGGAGCTGTCACAGTGGACCCTCAATCTTCAGGATATGACCCCAGACCTCTGATCCCGTATTTAAATGCCCTTGGAGTTCCTTACTTTTTCGAAGAGCAAGGAATTATTGAGCAGGCGGCTAAACTCACCGTATGCGAGTCCATATGCAGTTTCTGTTCCCGTATGAAGCGCGGACGTTTGTACGCATGCGCCAGACGTGAAAGTTACAATGTACTGGCCATGGGACAGCATTTGGATGACTTAGCTGAGAGTTTTTTAATGTCCGCTTTTCACAACGGTCTCTTGCGAACAATGAAGGCCAATTATACTGTCATGGAAGGTGATCTGCGAGTTATTCGTCCTTTTGTTTATGTTCGCGAAAAGGATCTTCGAAGTTTTGCTGAGAAGGTTAAACTTCCTGTAATTGCAGAAAACTGTCCGGCGTGTTTTGAGGCTCCCAAGGAACGCCACCGCACGAAGCAATTGCTAGCAGCTCAAGAAATATTGTTCCCTGACCTCTATAACAGTCTACTCACGGCCATGAAGCCACTAATGGCGCGTGACCGAGTGGGCCTGGAGTCAAGCAAGATGAAGAAGGGAAACTACGAAGACTTTCTCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q74GW7	tRNA-cytidine(32) 2-sulfurtransferase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=ttcA PE=3 SV=2
B6ELU0	tRNA-cytidine(32) 2-sulfurtransferase OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=ttcA PE=3 SV=1
Q5QZ01	tRNA-cytidine(32) 2-sulfurtransferase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=ttcA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001160 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01171 all species →	ATP_bind_3	PP-loop family	Family	Interproscan
PF00266 all species →	Aminotran_5	Aminotransferase class-V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011063 all species →	Domain	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR000192 all species →	Domain	Aminotransferase class V domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43686 all species →	SULFURTRANSFERASE-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_074620327.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_074620327.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.