Detailed information of XP_074620331.1 in Acropora palmata

Genomic Location: NC_133885.1:9500940...9511754
NR annotation: XP_044176536.1, histone deacetylase 6-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A8I6GM68Protein deacetylase HDAC6 OS=Rattus norvegicus OX=10116 GN=Hdac6 PE=3 SV=1
Q9UBN7Protein deacetylase HDAC6 OS=Homo sapiens OX=9606 GN=HDAC6 PE=1 SV=2
Q9Z2V5Protein deacetylase HDAC6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001139 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850
all species →		Hist_deacetylHistone deacetylase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023696
all species →		Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR023801
all species →		DomainHistone deacetylase domainInterproscan
IPR050284
all species →		FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR000286
all species →		FamilyHistone deacetylase familyInterproscan
IPR037138
all species →		Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10625
all species →		HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000118
all species →		Cellular Componenthistone deacetylase complexInterproscan
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407
all species →		Molecular Functionhistone deacetylase activityInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0016575
all species →		Biological Processobsolete histone deacetylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074620331.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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