Detailed information of XP_074620657.1 in Acropora palmata

Genomic Location: NC_133882.1:1669748...1707017
NR annotation: XP_029197633.2, LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R172Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus OX=10116 GN=Notch3 PE=2 SV=2
Q04721Neurogenic locus notch homolog protein 2 OS=Homo sapiens OX=9606 GN=NOTCH2 PE=1 SV=3
G3I6Z6Neurogenic locus notch homolog protein 1 OS=Cricetulus griseus OX=10029 GN=NOTCH1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00066NotchLNR domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF06816NODNOTCH proteinFamilyInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR008297FamilyNotchInterproscan
IPR000800DomainNotch domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR010660DomainNotch, NOD domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0050793Biological Processregulation of developmental processInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02599NOTCH1; Notch 1-Endocrine resistanceko01522deepkoala

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