Gene detail

Detailed information of XP_074622072.1 in Acropora palmata

Genomic Location: NC_133886.1:8029844...8034427
NR annotation: XP_029193728.1, EF-hand calcium-binding domain-containing protein 1-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1LWZ0	Calaxin OS=Danio rerio OX=7955 GN=clxn PE=2 SV=2
Q3KQ77	Calaxin OS=Xenopus laevis OX=8355 GN=clxn PE=2 SV=1
Q9HAE3	Calaxin OS=Homo sapiens OX=9606 GN=CLXN PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007486 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13833 all species →	EF-hand_8	EF-hand domain pair	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR028846 all species →	Family	Recoverin family	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23055 all species →	CALCIUM BINDING PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27179	ODAD5, CLXN, EFCAB1; outer dynein arm-docking complex subunit 5	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.