Detailed information of XP_074622550.1 in Acropora palmata

Genomic Location: NC_133886.1:22349005...22355650
NR annotation: XP_015750974.1, PREDICTED: trichohyalin-like [Acropora digitifera]
Species Acropora palmata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
V6CLA2E3 ubiquitin-protein ligase hecd-1 OS=Caenorhabditis elegans OX=6239 GN=hecd-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000763 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00619
all species →
CARDCaspase recruitment domainDomainInterproscan
PF00754
all species →
F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001315
all species →
DomainCARD domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000421
all species →
DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47457
all species →
OS05G0345500 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042981
all species →
Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074622550.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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