Detailed information of XP_074622726.1 in Acropora palmata

Genomic Location: NC_133886.1:16839627...16875619
NR annotation: XP_029199507.1, LOW QUALITY PROTEIN: integrin beta-1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P12606Integrin beta-1-A OS=Xenopus laevis OX=8355 GN=itgb1-a PE=2 SV=1
P12607Integrin beta-1-B OS=Xenopus laevis OX=8355 GN=itgb1-b PE=2 SV=1
P07228Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07965Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05719ITGB1, CD29; integrin beta 1-CD moleculesko04090deepkoala

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