Gene detail

Detailed information of XP_074623124.1 in Acropora palmata

Genomic Location: NC_133886.1:16989108...17013834
NR annotation: XP_029194895.2, V-type proton ATPase 116 kDa subunit a1-like isoform X1 [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074623124.1

ATGTCTTCCCTCTTTAGGTCAGAGCAAATGACACTGGCCCAACTTTTCCTTCAAGCAGAGGCCGCTTACGCTTGCGTTAGCGAGCTTGGAGAATTGGGCCTAGTGCAATTCCGAGATTTGAATCCTGATGTAAATGCTTTTCAACGGAAGTTTGTTAATGAAGTGAGGCGATGTGAAGAAATGGAAAGAAAGCTAAGGTTTTTAAGGAAAGAAATTGAGAAGGCTGACATTCATGTTGTTGACACTGGGGAAAACCCTGAAGCTCCCCACCCACGGGAGATGATTGACCTTGAGGCTCAATTTGAACAGTTGGAGAATGAAATGAAAGACAGCAATGCAAACTATGAAGCACTCATGAAAAGTTTCTTGGAGCTGACAGAGCTCAAACATATTTTACGCAAGACACAGACTTTTTTCGAAGAGGCCGAACTTCATGTGCATAATCAACAACAGATCCATGAACCACAGGGAACTGATGACATGCAAGCTTTGTTGGGAGAGGAGCCAAAAGGGGTATCCGGCACAGCCACGGCTACTCAACTGGGATTTGTCACAGGAGTGATCTCTCGTGAGCGGGTGCCCTCCTTTGAGCGTCTTTTGTGGCGTGCTTGTCGTGGCAATGTATTTTTCAAGCAAGCAGAGATTGAAACACCTCTGGAAGATCCAAGCACTGGAGACCTGGTCAATAAATGTGTTTTTATCATCTTCTTTCAAGGAGACCAACTTAAGAGCAGGGTGAAGAAAATTTGTGAGGGATTTCGTGCCACTCTGTACCCTTGTCCAGAAACTGCTGCTGAAAGACGAGAAATGGCCATTGGAGTAAACACAAGGATTGAGGACCTTCAAACTGTGTTGAATGAGACACGAGATCATCGTCATCGCCTCCTGCTTACTGTGGCTAAGAACATAAACCAGTGGTTCATTAAGGTGAAGAAGATTAAGGCAATATATCACACCATGAACATGTTCAATCTGGATGTGACACAGAAGTGCCTCATTGCTGAATGCTGGTGTCCAGTAAGCGATTTGGATAGGATTCAACAGGCACTGCGTCGTGGCACAGAACACAGTGGAGCTGCTATTCCATCCATCCTGAATCGTATGGCCACTCGTCAAGAGCCTCCAACTTTCAACAGGACAAATAAGTTTACACAGGGCTTTCAGGCGATAGTGGATGCATATGGTGTTGCCAACTACCAGGAAGTAAACCCAGCTCTGTTTACCATCATAACATTTCCCTTTCTGTTTGCTGTGATGTTTGGTGATTGTGGCCATGGTATGATCATGTTCCTGTTTGCTCTGTGGTTGGTTTGCAATGAGAAGAAACTACAAAACTATAGAGAAGGAGGAGAAATGTTTGAAACCTTGTTTGATGGCCGTTACATTATTCTGTTAATGGGTCTGTTTGCTGTGTACACTGGTCTCATTTACAATGACTGCTTTTCAAGATCTTTTAACATCTTTGGCTCTTGTTGGGATCTCAGTGCGGATTGGAGTTCTATCAGCGAAGATGCAATAAAATCCTACCTGAAGAACAAGCAGTCCAAAGGAGTCATGCTGGACCCAAAGAAAACCTACAGAGGAGCACCATACTACTTTGGTATTGATCCTATTTGGCAATTGGCTGTTAACAAACTAACCTTCACCAACTCATTCAAGATGAAGCTCTCTATTGTGTTTGGAGTGGCACACATGATGTTTGGAGTTTCTTTGAGTTTGTTCAACCACATGCACTTCAGGAAACCCTTGAACATAATTGCTGAGTTTATTCCTCAGGTCCTGTTTCTGTTTTGTATCTTTGGCTACTTGGTCATTATGATTTTCTACAAGTGGATTGCATTCAGTGCGAATTCTGAAAATCAACCAAGCTTGCTGTTGGCTCTCATTAACATGTTTCTCAAGTTTGGTACAGAAATTAAGAACAAGGATTTACTTTATCCTGGACAGGGTGTCCTTCAGTCAATACTTGTGGTCATAGCAGTGTTATGTGTTCCATGGATGTTGCTGGTGAAGCCATTTTATTTACGACACCAGCACAAACAAGATTTCCAGAGGCTCAGGTCAAGGCCATCCAGTCCTATCAATTCTGTAGCAGCTAACGTTGACGAATCAGTTGAAGGGGAAGTTGTTCATCGTGATGGTGAACCACAGGCAGGTCAGCACGTTGATGAAGAGGAGCATGAGGAGTTTGATTTTGGCGAAATATTTGTGCACCAGTCCATTCACACCATTGAGTACTGTTTGGGTTGCATCTCAAACACAGCATCCTATCTGCGGTTGTGGGCGCTTAGTCTGGCTCATGCAGAGTTGTCGGAAGTATTATGGAACATGGTGCTGCACCTGGCCCTTGGCATGGACGGCGTAGTTGGAATTCTAGCAACCTTTGTTCTGTTTGCATTCTGGGCTGTTATGACCATTGCCATTCTTCTTATCATGGAAGGACTATCAGCTTTCCTGCATGCCCTCCGTCTCCATTGGGTTGAATTCCAAAGCAAGTTTTATCAAGGAACAGGATACAAGTTCCAGCCATTCTCGTTTAAAGCGATGATATGGTGCATGGATGAATAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Z1G4	V-type proton ATPase 116 kDa subunit a 1 OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=1 SV=3
Q29466	V-type proton ATPase 116 kDa subunit a 1 OS=Bos taurus OX=9913 GN=ATP6V0A1 PE=1 SV=1
Q93050	V-type proton ATPase 116 kDa subunit a 1 OS=Homo sapiens OX=9606 GN=ATP6V0A1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001726 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01496 all species →	V_ATPase_I	V-type ATPase 116kDa subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002490 all species →	Family	V-type ATPase, V0 complex, 116kDa subunit family	Interproscan
IPR026028 all species →	Family	ATPase, V0 complex, subunit 116kDa, eukaryotic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11629 all species →	VACUOLAR PROTON ATPASES	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007035 all species →	Biological Process	vacuolar acidification	Interproscan
GO:0016471 all species →	Cellular Component	vacuolar proton-transporting V-type ATPase complex	Interproscan
GO:0033179 all species →	Cellular Component	proton-transporting V-type ATPase, V0 domain	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:0051117 all species →	Molecular Function	ATPase binding	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0000220 all species →	Cellular Component	vacuolar proton-transporting V-type ATPase, V0 domain	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02154	ATPeV0A, ATP6N; V-type H+-transporting ATPase subunit a	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.