Gene detail

Detailed information of XP_074624704.1 in Acropora palmata

Genomic Location: NC_133882.1:15620095...15665718
NR annotation: XP_029197189.2, importin-11-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074624704.1

ATGAATGAAGTTTGGAGGGACGAGGTGTTGCTTGCATTGAGCAATGCTTGTAGTCAAAATCCCGGGCTTGTTAAAGAGGCAGAAAAAAAGCTCGAAAATTGGGAGACACAAGCAGGGTTTTACAGCTTACTCATGTTTGTCTTTAGGAACAAATCACTTGATGTGAACATCCGTTGGATGGCAATTCTATATATTAAGATTGGTGTGGATCGTTACTGGCGGAAAACAGCTACTCATGCTATCTCAGAGGATGAAAAGACTTTCATGAAACAGAATCTGATGTTATCTTTTGATGAGCCTGTCAATCAGGTGGCGACTCAAATTGCTGTTCTTATTTCAAAAATTGCACGAACGGAACTCAAGGACTGGCCAGAGTTGCTGCCCACTCTGCTTAAGGATATCCAAAGTGAGGATGCATTCCATCAACAACGAACTCTGCTAATTTTTAATCATGTCATCAAAATGCTTGCTTCAAAGAGGTTGATTTGTGATCGGCAGCTGTTTCAACAAATAACTGGTGATACATTTGGTTTTATTCTTCAACTTTGGCAACATACTACATCTGCCTTGATGGAATTATATCAGAACAAGGATGGAAGAGTCTTGGCTTCCTTGGAACTTAGCACTTTAGTCCTCAAAGTTTTGAGGAAGATGGTAGTTCATGGATTCAAGGTGTTTGAACCTTCCTCTCAACCTGCGTGTTTACTTCAGGCAGTCCTGGAGAAGATAACGATTATTTTGCAATATAGAAAAGCTGAATCTGGAAATCGTGATTTACAAGAAAAACTGGGAAAATATTTATTACTGATGACCAAAGTGTTGATTGATACTCAAGAGCATTTACCATTATCCTTCTCACCACTCATACAACAGTCTTTACAGCTGTGCTATACATATTTATTTACGAGTCAAGGACGCGAGGATATTTTTGAAACGTTTGCACTGCAGTGTTGTAAACTCATCAAAGTGATTGTGATGTGTGACAAGTACAAACCACCAAGAGAAATAAAAGATACCACTCCCCAGGAAGTCCTTAAGGCACACCAGGCGAAGATGGCGTTCTTCACACCGGCAGTACTATCTGAAATAATTCATCAACTGGTGTTAAATTATTTCCCATTAACATCTGAGGATTTAGAAATTTGGGACTCAGATCCTGAAAGTGTTGTAAACGAAGAGGCAGGGGAGTCCTGGAGATTCAATTTAAGAGCTTGTACTGAGGTGTTGTATCTGAGCCTCTTAAACGAGTTTCGCAGCACAGTCACACCAGTAGTTACTGAAATGATCAAATTAGTACAAGGATCTCCCCCCTCTGATGAGATGAATGTGGTGTTGCAGAAAGATGCAGTGTACAATGCCTGTGGACTTGCTTCATACCACCTTTTTGATGAAGTGGACTTTGACCAGTGGTTCGTCAATCAGTTGGTTAATGAACTAAACAACTCTTCTCCAAGTTACAAGGTGTTGTGTAGGCGTATTATCTGGATGACAGGAGAGTGGATCAATGTAAAGGTTTCTCGTCAAACGCGGCCAGTCGTTTATCAAGTTTGTCTTAAGCTGATGAACGCTCAGGAAGATTTAGTGGTTCGATTGACTGCTGCCAATACTCTCAAAACTGCCATAGATGATGTGGATTTTAATTTGGATGATTTTCTTCAGTATTTGGATGAAACTTTTGGATCGCTTTTTCATCTGCTCAAATGCTCTCAGGATTGTGACACAAAGATGCACATTCTTAATGTGTTATCAATGGTTATCCAGTGCATTGGAAACAAGGTGCGACCATTCGCGTCCTCATTATCATTATACCTTCCCGAGTTGTGGCAGGAGTCTGGGAACCACAACATGCTTCAGTGCACAGTTGTTTCCACCGTGACACACTTAGTCAAGGGACTTGGTGTACTGAGTCAAAGTTTGTACTCATTTTTGTTACCTTTGATTCATATCAGCACGGATATAACCCAGCCCTCGCATGTTTACTTGTTGGAGGATGGGCTGGACCTCTGGCACAATGTCTTGATGAATGCTTCTCGTATAACTCCTGAATTACTGCACTTGTTTGTCAACCTTCAAGCCTTACTAGATTTCGGTTCAGAAAACCTTCGGATTTGTTTTGCCATCATTGAATCATACGTTCTGCTGGACGAGAAAGAGTTTTTGCAGAGCGTTAGCGCGCCCGTGGTAAATTCTTGCTTATCAATGCTTGGAAACATTAAAACAGAAGGTGGAATAATACTTTCTAAGGTCGTCGAGACAGTTATTAAAGTTTCACCCCTCAGAGGCACAGAGCTTTTTGCACAGGTCTTGCTCAAAATATTCCACATGATTCTTGAAGTGGAGGAATACACTCCTCTGTTAGTCATTTACCTGTGCATTGTTGGAGAAGTTATCTTGCATAATTATCCCGCGTTTGTGCAAATTGTCGAGAGTGTTGCCCAGCAGCTTAACAAACAGTCAACGGACGTTTTGACTCAGCTGTTAGATGTTTGGTTGGATAAAATGGATTGTATGACAAGGCTTGAGAGAAGAAAATTAACAGTTCTAGCATTGATGACTCTTTTACCGCTAAATGCCAATAACAAGTGTGTTCTGGACAAGTTTGCTGTCATCGTGGATTCTGCAGTCGACGTCCTCCATGAGATTCACAGAGTGGAAGAAGCCGGGATACCGACAGATTGCTTAGTTCTTCTCGGCGGAGGCACCGAAGATGAAGATCCCAACGAGGAATGCACGGAGGAATATAAGAGAAGAAGACAGCTTTGTTTGACGGATCCTGTTCATTGCTGTCCTTTGTGGAGGTTCGTCCGTGACAAGTTACACGAGTGTCACGCAATATATGGACAGGACACATTTAAGGAGCTTATGGATTGCGTAGACTCTGCTGTAACAACTCAGCTTGGTTCGTTTATCAATCACTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UI26	Importin-11 OS=Homo sapiens OX=9606 GN=IPO11 PE=1 SV=1
Q8K2V6	Importin-11 OS=Mus musculus OX=10090 GN=Ipo11 PE=1 SV=1
Q02932	Importin beta-like protein KAP120 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KAP120 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002527 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03810 all species →	IBN_N	Importin-beta N-terminal domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001494 all species →	Domain	Importin-beta, N-terminal domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10997 all species →	IMPORTIN-7, 8, 11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25201	IPO11, RANBP11; importin-11	-	Nucleocytoplasmic transport	ko03013	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.